Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 PGBD4P4-201ENST00000509673 613 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 RN7SKP92-201ENST00000517266 244 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 MYL12AP1-201ENST00000518490 515 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 AC008126.1-201ENST00000549019 480 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 AC020915.5-201ENST00000596836 964 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 MIR7702-201ENST00000621931 59 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 AP003497.2-201ENST00000624220 967 ntBASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAV27A0A087WT01 VPS35P1-201ENST00000563400 1518 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 RPS3AP23-201ENST00000401762 784 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AL133270.1-201ENST00000402635 279 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 RNA5SP104-201ENST00000410989 118 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 TRIM60P17-201ENST00000415181 719 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AL590139.1-201ENST00000416267 400 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC119751.6-201ENST00000416712 186 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 HSPE1P27-201ENST00000430808 296 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 SERPINA7P1-201ENST00000443077 631 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 RNA5SP519-201ENST00000516480 119 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC063950.1-201ENST00000552036 308 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC090515.3-201ENST00000560431 315 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AC096553.1-201ENST00000605169 829 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 AL158163.1-201ENST00000603915 1649 ntBASIC3.8□□□□□ -1.8
TRAV27A0A087WT01 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 EIF2AP4-201ENST00000424793 1781 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 RNU6-398P-201ENST00000384143 109 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 ELOCP8-201ENST00000439309 332 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AL353748.1-201ENST00000440753 474 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 ELOCP15-201ENST00000442090 332 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 RAD23BP3-201ENST00000454157 1152 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC010476.1-201ENST00000519111 851 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AP001804.2-201ENST00000533932 910 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 TRAV8-5-201ENST00000537369 341 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC063949.1-201ENST00000552900 865 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AC133552.5-201ENST00000604266 540 ntBASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAV27A0A087WT01 AL592182.3-201ENST00000642132 3304 ntBASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRAV27A0A087WT01 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms