Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC090819.1-201ENST00000523800 1111 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC004825.1-201ENST00000555068 586 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AL049779.3-201ENST00000557141 606 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR1273E-201ENST00000581165 102 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC022069.1-201ENST00000582910 658 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR4260-201ENST00000583107 67 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 MIR4999-201ENST00000585029 91 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC009027.1-201ENST00000604510 479 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AL445670.1-201ENST00000618889 801 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AC079248.2-201ENST00000623779 326 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 AF001550.2-201ENST00000636643 217 ntBASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA3Q9Y5H0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA3Q9Y5H0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA3Q9Y5H0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA3Q9Y5H0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.59□□□□□ -1.52
PCDHGA3Q9Y5H0 AC053481.2-202ENST00000582394 1500 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 DCAF13P3-201ENST00000561147 1334 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL445437.1-201ENST00000623157 3087 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 GVINP1-202ENST00000531871 7271 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 IL6STP1-201ENST00000346911 1020 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 RN7SKP162-201ENST00000363605 345 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 RN7SKP29-201ENST00000410957 272 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC009965.2-201ENST00000425328 970 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL627308.1-201ENST00000435693 821 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 MTCO3P11-201ENST00000455103 774 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 RPS3AP43-201ENST00000479743 781 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 ACTG1P13-201ENST00000486987 1043 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 OR7E157P-201ENST00000494376 911 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 XKRY-201ENST00000510392 1100 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 TOMM22P4-201ENST00000511318 336 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU6-615P-201ENST00000516065 106 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 SNORA43.3-201ENST00000517240 103 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 TPM3P3-201ENST00000521343 354 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC027026.1-201ENST00000532323 742 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 UBE2NP1-201ENST00000545592 458 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL049872.1-201ENST00000556323 322 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 ISCA1P3-201ENST00000577104 373 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC090616.2-202ENST00000584248 222 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC079395.2-201ENST00000610982 737 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC005332.6-201ENST00000613178 446 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AP000676.3-201ENST00000623299 569 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 AC009229.4-201ENST00000623854 1947 ntBASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA3Q9Y5H0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 USP9YP4-201ENST00000424401 1745 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms