Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 AC005839.1-201ENST00000624148 3213 ntBASIC8.07□□□□□ -1.12
HPS5Q9UPZ3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 MAPK10-357ENST00000641831 2858 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 Y_RNA.112-201ENST00000363250 102 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 RN7SKP6-201ENST00000364795 319 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 SET-203ENST00000372688 801 ntTSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 RNU2-8P-201ENST00000410727 190 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC009965.2-201ENST00000425328 970 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 SRIP2-201ENST00000428470 166 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 SKP1P3-201ENST00000429280 487 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC003989.1-201ENST00000434569 565 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC073415.1-201ENST00000449240 153 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 NPM1P39-201ENST00000449818 867 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC110749.1-201ENST00000462007 357 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC012181.1-201ENST00000479895 423 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC026826.1-201ENST00000493002 361 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC112204.1-201ENST00000502591 103 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC095057.1-201ENST00000507583 168 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 SNORA40.12-201ENST00000516329 111 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 RNU6-764P-201ENST00000516396 105 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC009902.1-201ENST00000519351 183 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 NRBF2P4-201ENST00000520874 850 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 PTP4A1P6-201ENST00000531034 478 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL049870.4-201ENST00000555741 486 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 CKS1BP3-201ENST00000600888 237 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 MIR98-201ENST00000606724 119 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC093635.1-201ENST00000609028 555 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AL161734.1-201ENST00000609720 557 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 RMST_9.1-201ENST00000619945 193 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC127070.3-201ENST00000503695 3263 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 CDR1-202ENST00000625883 1485 ntBASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
HPS5Q9UPZ3 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 OR1S2-201ENST00000302592 978 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 Y_RNA.187-201ENST00000363918 113 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 RNU6-316P-201ENST00000391027 107 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 PRELID1P1-201ENST00000403549 660 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 NPM1P38-201ENST00000403835 865 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AL354890.1-201ENST00000413730 346 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AC083875.1-201ENST00000419509 405 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 CHEK2P5-201ENST00000423877 246 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AL589872.1-201ENST00000426602 288 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 DPY19L1P2-201ENST00000426647 915 ntBASIC8.05□□□□□ -1.12
HPS5Q9UPZ3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms