Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.75□□□□□ -1.33
RIMBP3Q9UFD9 AL136164.3-201ENST00000624429 3978 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AC139769.1-204ENST00000472297 1931 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 RNU1-20P-201ENST00000363314 162 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AC015912.2-201ENST00000571053 181 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 MIR8057-201ENST00000620957 69 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
RIMBP3Q9UFD9 AL034370.1-201ENST00000397254 1590 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 HSPE1P12-201ENST00000412576 301 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 AK4P6-201ENST00000505168 528 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 AL049830.4-201ENST00000555149 351 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 AC090312.1-201ENST00000580637 348 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 AC023762.1-201ENST00000603280 584 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 AC093297.3-201ENST00000607056 2517 ntBASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
RIMBP3Q9UFD9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 UBE2CP3-201ENST00000502715 450 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC004817.4-201ENST00000602396 3625 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 MIR490-201ENST00000384865 128 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RPL7P44-201ENST00000424827 742 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RPL21P43-201ENST00000425440 472 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 NPM1P18-201ENST00000434232 732 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RPL23AP46-201ENST00000438548 490 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC093166.2-201ENST00000455969 1017 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC112206.1-201ENST00000468416 477 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RN7SL807P-201ENST00000470923 297 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RPL7P23-201ENST00000493874 747 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 RNA5SP360-201ENST00000516555 118 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 MIR4672-201ENST00000583126 81 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 AC012493.2-201ENST00000595083 291 ntBASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RIMBP3Q9UFD9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RIMBP3Q9UFD9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RIMBP3Q9UFD9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.71□□□□□ -1.33
RIMBP3Q9UFD9 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
RIMBP3Q9UFD9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RIMBP3Q9UFD9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 AL831737.1-201ENST00000441288 271 ntBASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 RPL21P8-201ENST00000465083 535 ntBASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 ATP1B1P1-201ENST00000509767 915 ntBASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.71□□□□□ -1.34
RIMBP3Q9UFD9 ADAD1P2-201ENST00000588476 646 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms