Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 RNU4-6P-201ENST00000410804 122 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 OR2AH1P-201ENST00000425717 928 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 NOTCH2P1-201ENST00000443481 624 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 RPL23AP81-201ENST00000455252 467 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 RPS4XP18-201ENST00000495480 763 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 RNA5SP497-201ENST00000516081 97 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 MIR5685-201ENST00000579080 79 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 MIR4472-2-201ENST00000582069 67 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 BNIP3P19-201ENST00000605397 577 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 AC012314.7-201ENST00000619693 93 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 CASC19-261ENST00000641853 1638 ntBASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PHRF1Q9P1Y6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AP001002.1-201ENST00000625148 1513 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 RNU1-20P-201ENST00000363314 162 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 U8.11-201ENST00000384699 133 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 U8.12-201ENST00000384701 133 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AL139039.2-201ENST00000407436 479 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 RPS4XP4-201ENST00000443195 763 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 U8.18-201ENST00000459285 133 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 RPL23AP37-201ENST00000479658 549 ntBASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.68□□□□□ -1.5
PHRF1Q9P1Y6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 EIF3EP2-201ENST00000423042 1814 ntBASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 RNA5SP175-201ENST00000364275 119 ntBASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 AL358178.1-201ENST00000407698 397 ntBASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 OR5BE1P-201ENST00000425977 939 ntBASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 AC099669.2-201ENST00000616549 437 ntBASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 OR5BE1P-202ENST00000641168 1176 ntBASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHRF1Q9P1Y6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 CTSL3P-202ENST00000412179 788 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AL450992.3-201ENST00000413192 568 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC114814.2-201ENST00000419195 485 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AL445433.1-201ENST00000457507 257 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC090013.1-201ENST00000485147 480 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AL021997.2-201ENST00000615674 271 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 OR4A15-201ENST00000314706 1035 ntBASIC5.66□□□□□ -1.5
PHRF1Q9P1Y6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms