Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 GNG5P1-201ENST00000255500 204 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP6-201ENST00000364795 319 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RNU4-20P-201ENST00000365601 151 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RNU6-26P-201ENST00000383985 107 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 Y_RNA.574-201ENST00000384766 95 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RNU6-33P-201ENST00000384793 107 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP139-201ENST00000410411 293 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL035660.1-201ENST00000422041 222 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 DPY19L1P2-201ENST00000426647 915 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 OR51AB1P-201ENST00000429046 620 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 BMS1P19-201ENST00000433925 393 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 SKP1P1-201ENST00000438081 489 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL157827.1-201ENST00000447622 132 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 RANP1-206ENST00000455094 651 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC005532.2-201ENST00000467154 373 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC016687.1-201ENST00000482574 353 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 UBA52P7-201ENST00000486088 380 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 SNORA40.12-201ENST00000516329 111 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC109635.4-202ENST00000531666 412 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC141257.3-201ENST00000572906 215 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 MIR3680-2-201ENST00000578247 87 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 MIR3680-1-201ENST00000581433 87 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC067931.1-201ENST00000624190 671 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC011815.3-201ENST00000624194 473 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AL359757.2-201ENST00000624309 274 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC063952.1-203ENST00000634410 658 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 CDR1-202ENST00000625883 1485 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC005538.2-201ENST00000623215 1864 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 OR5BR1P-201ENST00000524992 1330 ntBASIC6.76□□□□□ -1.33
COL25A1Q9BXS0 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MTND5P6-201ENST00000422338 1798 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC007485.2-201ENST00000623493 1667 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC105046.1-201ENST00000566457 4997 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPL7P26-201ENST00000333817 754 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RNA5SP350-201ENST00000363298 111 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 SNORA38B-201ENST00000363524 131 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RNA5SP507-201ENST00000363603 121 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RNU6-1017P-201ENST00000363613 106 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MTCYBP4-201ENST00000401524 249 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AL049697.2-201ENST00000403708 294 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RNU4-14P-201ENST00000410858 122 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RN7SKP247-201ENST00000411094 308 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPL23AP27-201ENST00000415161 451 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPL7P10-201ENST00000417407 739 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MTATP6P18-201ENST00000417994 673 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC007562.1-201ENST00000421819 517 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPS7P14-201ENST00000426405 583 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms