Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 MIR4502-201ENST00000580432 81 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC091805.2-201ENST00000603848 235 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC090186.1-201ENST00000605991 572 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC092354.2-201ENST00000607786 514 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC025588.4-201ENST00000615802 908 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC125238.2-201ENST00000430003 1440 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC005332.5-201ENST00000591222 2919 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC133552.1-201ENST00000569988 4007 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RNU1-46P-201ENST00000384425 164 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RNU6-1215P-201ENST00000384441 102 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RN7SKP281-201ENST00000410472 352 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RNA5SP115-201ENST00000411160 107 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RPS15AP40-201ENST00000419621 391 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC079807.1-201ENST00000429993 481 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC094019.1-201ENST00000434678 472 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 HSPE1P28-201ENST00000443139 211 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MTCYBP1-201ENST00000454315 1119 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AL139156.3-201ENST00000454802 394 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC109464.2-201ENST00000510242 943 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CR383656.6-201ENST00000550518 394 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 NPM1P42-201ENST00000560329 862 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RN7SL475P-201ENST00000583379 298 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC079315.1-201ENST00000602952 623 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AP000403.1-201ENST00000603349 851 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MIR6071-201ENST00000616741 78 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC023245.2-201ENST00000530760 2978 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 AC092447.7-201ENST00000422212 1621 ntBASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.01□□□□□ -1.29
TRAIPQ9BWF2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 CASC19-228ENST00000641414 1684 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 TEX21P-201ENST00000447107 1476 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC104966.1-201ENST00000467010 1464 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 CASC19-221ENST00000641309 1382 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 AC130304.1-201ENST00000622942 2385 ntBASIC7□□□□□ -1.29
TRAIPQ9BWF2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TRAIPQ9BWF2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
TRAIPQ9BWF2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms