Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 RN7SL812P-201ENST00000493791 279 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 AL158156.1-201ENST00000422509 473 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 MTCO1P45-201ENST00000431457 267 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 PDSS1P2-201ENST00000449397 678 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 AC037198.2-201ENST00000478845 733 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 RPS3AP6-201ENST00000484430 795 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 FTH1P9-201ENST00000513251 355 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 MIR4672-201ENST00000583126 81 ntBASIC4.05□□□□□ -1.76
VPS13AQ96RL7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS13AQ96RL7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC104260.2-201ENST00000623551 3497 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 RNU1-33P-201ENST00000364249 162 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC006011.1-201ENST00000442758 349 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 SUMO2P19-201ENST00000518920 295 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AL591135.1-201ENST00000401578 5914 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AL133383.2-201ENST00000622958 2336 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 CTSL3P-202ENST00000412179 788 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 PCNPP4-201ENST00000414817 517 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 SERPINA7P1-201ENST00000443077 631 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 UBDP1-202ENST00000457888 382 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC116667.1-201ENST00000604855 2072 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 MTCO1P12-201ENST00000414273 1543 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 CCDC162P-202ENST00000368966 6751 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 U3.26-201ENST00000391236 204 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 AC010374.1-201ENST00000503762 1237 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 MIR5187-201ENST00000583479 76 ntBASIC4.04□□□□□ -1.76
VPS13AQ96RL7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS13AQ96RL7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 U1.1-201ENST00000384101 164 ntBASIC4.03□□□□□ -1.76
VPS13AQ96RL7 AC062016.2-201ENST00000420950 676 ntBASIC4.03□□□□□ -1.76
VPS13AQ96RL7 AC104333.2-201ENST00000422630 192 ntBASIC4.03□□□□□ -1.76
VPS13AQ96RL7 AC017083.1-201ENST00000428093 483 ntBASIC4.03□□□□□ -1.76
VPS13AQ96RL7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.03□□□□□ -1.76
VPS13AQ96RL7 AC119674.1-212ENST00000641155 993 ntBASIC4.03□□□□□ -1.76
VPS13AQ96RL7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS13AQ96RL7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms