Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 RNU1-83P-201ENST00000363426 164 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 SNORA57.3-201ENST00000411095 141 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 ABCF2P2-201ENST00000450549 296 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC097486.1-201ENST00000515331 210 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 RNU1-95P-201ENST00000516357 160 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 RNU1-128P-201ENST00000516704 160 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC090312.1-201ENST00000580637 348 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AL442067.2-201ENST00000614033 363 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC007068.1-201ENST00000396690 844 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 AL450992.3-201ENST00000413192 568 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 EIF1P3-201ENST00000423841 334 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC006011.1-201ENST00000442758 349 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TOPBP1Q92547 HPRT1P2-201ENST00000505250 544 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 YPEL5P3-201ENST00000547227 352 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 ZNF415P1-201ENST00000582279 1166 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 AC005255.1-201ENST00000593748 216 ntBASIC7.01□□□□□ -1.29
TOPBP1Q92547 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.01□□□□□ -1.29
TOPBP1Q92547 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7□□□□□ -1.29
TOPBP1Q92547 LYST-202ENST00000389794 12985 ntTSL 5 BASIC7□□□□□ -1.29
TOPBP1Q92547 OR5BE1P-201ENST00000425977 939 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7□□□□□ -1.29
TOPBP1Q92547 RPS4XP4-201ENST00000443195 763 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7□□□□□ -1.29
TOPBP1Q92547 RPS11P1-201ENST00000451072 473 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 OR9M1P-201ENST00000459641 921 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 RPS29P19-201ENST00000479709 171 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7□□□□□ -1.29
TOPBP1Q92547 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC7□□□□□ -1.29
TOPBP1Q92547 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7□□□□□ -1.29
TOPBP1Q92547 AL034408.1-202ENST00000636088 415 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 OR5BE1P-202ENST00000641168 1176 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 TET1P1-201ENST00000426627 2301 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TOPBP1Q92547 AC105074.1-201ENST00000623380 3095 ntBASIC7□□□□□ -1.29
TOPBP1Q92547 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
TOPBP1Q92547 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TOPBP1Q92547 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
TOPBP1Q92547 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
TOPBP1Q92547 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
TOPBP1Q92547 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.99□□□□□ -1.29
TOPBP1Q92547 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TOPBP1Q92547 AC007066.1-201ENST00000392902 381 ntBASIC6.99□□□□□ -1.29
TOPBP1Q92547 AL159169.3-201ENST00000608871 561 ntBASIC6.99□□□□□ -1.29
TOPBP1Q92547 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
TOPBP1Q92547 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.99□□□□□ -1.29
TOPBP1Q92547 LINC00561-201ENST00000565815 2738 ntBASIC6.99□□□□□ -1.29
TOPBP1Q92547 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TOPBP1Q92547 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
TOPBP1Q92547 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
TOPBP1Q92547 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 AC114878.2-201ENST00000604863 1251 ntBASIC6.98□□□□□ -1.29
TOPBP1Q92547 AC091905.2-201ENST00000623143 306 ntBASIC6.98□□□□□ -1.29
TOPBP1Q92547 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
TOPBP1Q92547 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.98□□□□□ -1.29
TOPBP1Q92547 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
TOPBP1Q92547 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TOPBP1Q92547 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
TOPBP1Q92547 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
TOPBP1Q92547 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TOPBP1Q92547 MIR218-2-201ENST00000385006 110 ntBASIC6.97□□□□□ -1.29
TOPBP1Q92547 MIR34B-201ENST00000385076 84 ntBASIC6.97□□□□□ -1.29
TOPBP1Q92547 RPL21P17-201ENST00000397467 475 ntBASIC6.97□□□□□ -1.29
TOPBP1Q92547 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms