Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC093012.1-202ENST00000549403 582 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC103968.1-201ENST00000557841 573 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC090236.2-201ENST00000587933 1101 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC040896.1-201ENST00000613819 479 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AL122125.1-201ENST00000616999 600 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AL121890.2-201ENST00000617644 465 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 RMST_5.1-201ENST00000618704 126 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AL136228.1-201ENST00000622221 319 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 AC073348.1-201ENST00000623002 331 ntBASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.45□□□□□ -1.38
SHKBP1Q8TBC3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RNA5SP478-201ENST00000364657 115 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SNORA43.1-201ENST00000364863 140 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 Y_RNA.311-201ENST00000365068 96 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RN7SKP81-201ENST00000365603 331 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RNA5SP284-201ENST00000384547 118 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RNU6-907P-201ENST00000390924 102 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SNORA17A-201ENST00000391185 133 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC007066.1-201ENST00000392902 381 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC069157.1-201ENST00000421749 137 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RPL31P54-201ENST00000429803 370 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AL365184.2-201ENST00000431139 435 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC005077.1-201ENST00000449226 375 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RPS7P6-201ENST00000485777 579 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 PPIAP19-201ENST00000486414 492 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RN7SL193P-201ENST00000491708 276 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 RPL17P2-201ENST00000491913 451 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC108078.1-201ENST00000508073 725 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 OR4A12P-201ENST00000530847 918 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 HPRT1P3-201ENST00000539521 576 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 HMGB1P33-201ENST00000563485 527 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 PCMTD1P2-201ENST00000565017 355 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 MIR3913-1-201ENST00000577744 102 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AL590282.1-201ENST00000610379 1136 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC005962.2-201ENST00000611427 652 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC069209.1-201ENST00000619282 651 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SNORA17.5-201ENST00000630429 132 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 CCT4P2-201ENST00000233836 1548 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 AF287957.1-201ENST00000607368 1595 ntBASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHKBP1Q8TBC3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 AC092070.2-203ENST00000598377 3644 ntBASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.43□□□□□ -1.38
SHKBP1Q8TBC3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms