Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NXT1P1-201ENST00000458481 316 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC110749.1-201ENST00000462007 357 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 RPL30P9-201ENST00000465586 330 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC096576.1-201ENST00000489014 359 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC022206.1-201ENST00000495947 347 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 ARL2BPP2-201ENST00000550907 489 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 CYCSP38-201ENST00000559840 322 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC015917.1-201ENST00000579654 510 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC005332.4-201ENST00000592752 579 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 RPSAP75-201ENST00000605848 301 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AP000238.1-201ENST00000608759 426 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AL359535.1-201ENST00000612100 1087 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC069209.1-201ENST00000619282 651 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AL590763.1-201ENST00000398297 1545 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC105235.1-201ENST00000623208 1816 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 UGT2B24P-201ENST00000514441 1597 ntBASIC6.52□□□□□ -1.36
RNF43Q68DV7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
RNF43Q68DV7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.52□□□□□ -1.36
RNF43Q68DV7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 MTCO1P23-201ENST00000415223 1526 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC092070.2-203ENST00000598377 3644 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 MIR323A-201ENST00000362199 86 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 Y_RNA.142-201ENST00000363491 102 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 Y_RNA.302-201ENST00000364997 102 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 RNU6-297P-201ENST00000384636 107 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 MTCO3P40-201ENST00000392516 676 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 RN7SKP144-201ENST00000411108 279 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC098592.2-201ENST00000413158 265 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC019050.1-201ENST00000418508 492 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC066692.1-201ENST00000421721 457 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 RPS7P14-201ENST00000426405 583 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 IGLV3-4-201ENST00000432300 244 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 PNKDP1-201ENST00000435914 430 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 MTCYBP6-201ENST00000441810 138 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 CXCR2P1-202ENST00000443392 1074 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 RPL7P31-201ENST00000450192 724 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 RPL23AP35-201ENST00000451906 501 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 RN7SL326P-201ENST00000477493 296 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 PPIAP19-201ENST00000486414 492 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 IGBP1P4-201ENST00000503202 879 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC019235.1-201ENST00000503847 207 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC005832.3-201ENST00000537929 631 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF43Q68DV7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF43Q68DV7 AC092747.2-201ENST00000545069 983 ntBASIC6.52□□□□□ -1.37
RNF43Q68DV7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms