Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.7□□□□□ -1.5
COL16A1Q07092 AC022655.2-201ENST00000577280 318 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 AC005034.4-201ENST00000603612 899 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 AC010201.1-201ENST00000605051 540 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COL16A1Q07092 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL16A1Q07092 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL16A1Q07092 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 AL355852.1-201ENST00000454081 1771 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 RNU6-1279P-201ENST00000383917 103 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 EI24P3-201ENST00000399046 1062 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 BTF3P6-201ENST00000448054 499 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 RN7SL293P-201ENST00000481765 281 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.7□□□□□ -1.5
COL16A1Q07092 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.7□□□□□ -1.5
COL16A1Q07092 AC015914.2-201ENST00000618167 288 ntBASIC5.7□□□□□ -1.5
COL16A1Q07092 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL16A1Q07092 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.7□□□□□ -1.5
COL16A1Q07092 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 CASC19-206ENST00000641028 1430 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 ERCC6-202ENST00000374127 1782 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.69□□□□□ -1.5
COL16A1Q07092 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 RPL38P1-201ENST00000460914 211 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 HMGN1P15-201ENST00000513870 295 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.69□□□□□ -1.5
COL16A1Q07092 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.69□□□□□ -1.5
COL16A1Q07092 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.69□□□□□ -1.5
COL16A1Q07092 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.69□□□□□ -1.5
COL16A1Q07092 AC090312.1-201ENST00000580637 348 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.69□□□□□ -1.5
COL16A1Q07092 AL049634.3-201ENST00000604968 457 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.69□□□□□ -1.5
COL16A1Q07092 VPS35P1-201ENST00000563400 1518 ntBASIC5.69□□□□□ -1.5
COL16A1Q07092 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.69□□□□□ -1.5
COL16A1Q07092 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL16A1Q07092 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.69□□□□□ -1.5
COL16A1Q07092 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.68□□□□□ -1.5
COL16A1Q07092 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
COL16A1Q07092 OR5BE1P-201ENST00000425977 939 ntBASIC5.68□□□□□ -1.5
COL16A1Q07092 OR4F13P-201ENST00000428478 931 ntBASIC5.68□□□□□ -1.5
COL16A1Q07092 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.68□□□□□ -1.5
COL16A1Q07092 OR9M1P-201ENST00000459641 921 ntBASIC5.68□□□□□ -1.5
COL16A1Q07092 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.68□□□□□ -1.5
COL16A1Q07092 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.68□□□□□ -1.5
COL16A1Q07092 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.68□□□□□ -1.5
COL16A1Q07092 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.68□□□□□ -1.5
COL16A1Q07092 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.68□□□□□ -1.5
COL16A1Q07092 AL137843.1-201ENST00000605078 385 ntBASIC5.68□□□□□ -1.5
COL16A1Q07092 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.68□□□□□ -1.5
COL16A1Q07092 OR5BE1P-202ENST00000641168 1176 ntBASIC5.68□□□□□ -1.5
COL16A1Q07092 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.68□□□□□ -1.5
COL16A1Q07092 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
COL16A1Q07092 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.68□□□□□ -1.5
COL16A1Q07092 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL16A1Q07092 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL16A1Q07092 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL16A1Q07092 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL16A1Q07092 RNU2-65P-201ENST00000410162 185 ntBASIC5.67□□□□□ -1.5
COL16A1Q07092 NPM1P36-201ENST00000415681 835 ntBASIC5.67□□□□□ -1.5
COL16A1Q07092 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.67□□□□□ -1.5
COL16A1Q07092 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.67□□□□□ -1.5
COL16A1Q07092 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.67□□□□□ -1.5
COL16A1Q07092 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.67□□□□□ -1.5
COL16A1Q07092 RPS29P2-201ENST00000479278 136 ntBASIC5.67□□□□□ -1.5
COL16A1Q07092 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.67□□□□□ -1.5
COL16A1Q07092 GTF2IP8-201ENST00000560687 584 ntBASIC5.67□□□□□ -1.5
COL16A1Q07092 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.67□□□□□ -1.5
COL16A1Q07092 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.67□□□□□ -1.5
COL16A1Q07092 AP002360.3-201ENST00000607673 710 ntBASIC5.67□□□□□ -1.5
COL16A1Q07092 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
COL16A1Q07092 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.67□□□□□ -1.5
COL16A1Q07092 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COL16A1Q07092 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL16A1Q07092 AC009229.4-201ENST00000623854 1947 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms