Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 OR9K1P-201ENST00000326513 941 ntBASIC4.97□□□□□ -1.61
RAE1P78406 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RAE1P78406 U3.3-201ENST00000362986 216 ntBASIC4.97□□□□□ -1.61
RAE1P78406 RNU6-707P-201ENST00000364647 95 ntBASIC4.97□□□□□ -1.61
RAE1P78406 RNA5SP90-201ENST00000364801 99 ntBASIC4.97□□□□□ -1.61
RAE1P78406 Y_RNA.465-201ENST00000384293 102 ntBASIC4.97□□□□□ -1.61
RAE1P78406 SKINT1L-201ENST00000401057 817 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.97□□□□□ -1.61
RAE1P78406 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 REREP1Y-201ENST00000422655 198 ntBASIC4.97□□□□□ -1.61
RAE1P78406 EI24P4-201ENST00000423683 1078 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 UBE2V1P1-201ENST00000430836 445 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AL365396.1-201ENST00000430854 671 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 GTF2IP7-202ENST00000436677 309 ntBASIC4.97□□□□□ -1.61
RAE1P78406 GAPDHP58-201ENST00000438477 1006 ntBASIC4.97□□□□□ -1.61
RAE1P78406 REREP2Y-201ENST00000439103 200 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 HMGB1P48-201ENST00000446155 598 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 AC104978.1-201ENST00000449387 391 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AL133217.1-201ENST00000450980 425 ntBASIC4.97□□□□□ -1.61
RAE1P78406 MRPL42P4-201ENST00000453267 443 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 AC011979.1-201ENST00000472300 483 ntBASIC4.97□□□□□ -1.61
RAE1P78406 CR383656.1-201ENST00000484916 377 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC084024.2-201ENST00000503480 791 ntBASIC4.97□□□□□ -1.61
RAE1P78406 MTCO3P28-201ENST00000513351 515 ntBASIC4.97□□□□□ -1.61
RAE1P78406 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 AC138832.1-201ENST00000522871 556 ntBASIC4.97□□□□□ -1.61
RAE1P78406 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.97□□□□□ -1.61
RAE1P78406 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 AP003461.1-201ENST00000528866 78 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 AP002373.2-201ENST00000541631 1060 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC010198.2-201ENST00000550612 259 ntBASIC4.97□□□□□ -1.61
RAE1P78406 NBEAP1-201ENST00000554452 979 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 Z99497.2-201ENST00000603634 310 ntBASIC4.97□□□□□ -1.61
RAE1P78406 LSM1P2-201ENST00000604911 322 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC018638.7-201ENST00000605836 1114 ntBASIC4.97□□□□□ -1.61
RAE1P78406 VIS1.1-201ENST00000610517 203 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC118658.2-201ENST00000618697 459 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC026124.2-201ENST00000621847 656 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC067852.7-201ENST00000623270 535 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AP003497.2-201ENST00000624220 967 ntBASIC4.97□□□□□ -1.61
RAE1P78406 AC092608.3-201ENST00000625017 386 ntBASIC4.97□□□□□ -1.61
RAE1P78406 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
RAE1P78406 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.97□□□□□ -1.61
RAE1P78406 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RAE1P78406 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RAE1P78406 AC133552.1-201ENST00000569988 4007 ntBASIC4.97□□□□□ -1.61
RAE1P78406 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RAE1P78406 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RAE1P78406 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
RAE1P78406 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
RAE1P78406 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RAE1P78406 AP005901.5-201ENST00000545779 1796 ntBASIC4.96□□□□□ -1.61
RAE1P78406 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 RNA5SP132-201ENST00000364725 118 ntBASIC4.96□□□□□ -1.62
RAE1P78406 RNA5SP223-201ENST00000365174 120 ntBASIC4.96□□□□□ -1.62
RAE1P78406 RN7SKP81-201ENST00000365603 331 ntBASIC4.96□□□□□ -1.62
RAE1P78406 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 AC009804.1-201ENST00000400949 179 ntBASIC4.96□□□□□ -1.62
RAE1P78406 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RAE1P78406 RN7SKP59-201ENST00000410520 314 ntBASIC4.96□□□□□ -1.62
RAE1P78406 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.96□□□□□ -1.62
RAE1P78406 AC002069.1-201ENST00000429649 1159 ntBASIC4.96□□□□□ -1.62
RAE1P78406 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.96□□□□□ -1.62
RAE1P78406 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RAE1P78406 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.96□□□□□ -1.62
RAE1P78406 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RAE1P78406 RHEBP2-201ENST00000450289 600 ntBASIC4.96□□□□□ -1.62
RAE1P78406 SEPT7P3-201ENST00000455017 621 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms