Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN20P56880 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 AP001207.2-201ENST00000519490 539 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLDN20P56880 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.63□□□□□ -1.67
CLDN20P56880 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.63□□□□□ -1.67
CLDN20P56880 ZNF971P-201ENST00000562068 1249 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 AC011447.4-201ENST00000587562 111 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN20P56880 MTCO2P2-201ENST00000591258 225 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN20P56880 MIR8069-1-201ENST00000616627 86 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 MIR8069-2-201ENST00000621412 86 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 AP000770.2-201ENST00000623694 100 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN20P56880 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.63□□□□□ -1.67
CLDN20P56880 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN20P56880 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN20P56880 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLDN20P56880 TTC39DP-201ENST00000416781 1688 ntBASIC4.63□□□□□ -1.67
CLDN20P56880 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CLDN20P56880 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLDN20P56880 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.63□□□□□ -1.67
CLDN20P56880 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 AC093311.1-201ENST00000506586 2021 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 SNORA74A-201ENST00000364089 198 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLDN20P56880 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLDN20P56880 ANAPC10P1-201ENST00000395991 556 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AL645927.1-201ENST00000396783 406 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AL603865.2-201ENST00000401679 213 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 HMGB3P18-201ENST00000406327 590 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 RN7SKP199-201ENST00000410325 305 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 RN7SKP114-201ENST00000410327 279 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 RPS3AP25-201ENST00000411660 793 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC093162.1-201ENST00000419682 124 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 USP9YP21-201ENST00000420603 432 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC007394.1-201ENST00000421941 531 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN20P56880 GAPDHP58-201ENST00000438477 1006 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN20P56880 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 AL009048.1-201ENST00000450437 298 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC112206.1-201ENST00000468416 477 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN20P56880 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC097173.1-201ENST00000505862 819 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC004980.4-201ENST00000513375 203 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 AC105031.1-201ENST00000518550 476 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC034205.1-201ENST00000520621 638 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC125612.1-201ENST00000547580 377 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC027104.1-201ENST00000563702 681 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.62□□□□□ -1.67
CLDN20P56880 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 Z82195.1-201ENST00000604558 398 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC073387.2-201ENST00000604797 784 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN20P56880 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.62□□□□□ -1.67
CLDN20P56880 AP002799.1-201ENST00000623552 423 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN20P56880 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN20P56880 HSPA8P18-201ENST00000439846 1928 ntBASIC4.62□□□□□ -1.67
CLDN20P56880 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN20P56880 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN20P56880 SCARNA15-201ENST00000607520 4325 ntBASIC4.61□□□□□ -1.67
CLDN20P56880 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms