Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.6□□□□□ -1.67
CASP9P55211 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CASP9P55211 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CASP9P55211 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.6□□□□□ -1.67
CASP9P55211 AC092162.3-201ENST00000624511 1624 ntBASIC4.6□□□□□ -1.67
CASP9P55211 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CASP9P55211 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP9P55211 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP9P55211 OR52B1P-201ENST00000316506 909 ntBASIC4.59□□□□□ -1.67
CASP9P55211 RNA5SP305-201ENST00000362665 119 ntBASIC4.59□□□□□ -1.67
CASP9P55211 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.59□□□□□ -1.67
CASP9P55211 E2F6P2-201ENST00000420708 748 ntBASIC4.59□□□□□ -1.67
CASP9P55211 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.59□□□□□ -1.67
CASP9P55211 FO393419.3-201ENST00000428741 282 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC092162.1-201ENST00000432828 434 ntBASIC4.59□□□□□ -1.67
CASP9P55211 ZFAND6P1-201ENST00000434138 605 ntBASIC4.59□□□□□ -1.67
CASP9P55211 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC006466.1-201ENST00000438721 289 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP9P55211 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP9P55211 AL353093.1-201ENST00000441292 436 ntBASIC4.59□□□□□ -1.67
CASP9P55211 OR7E125P-201ENST00000443450 846 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AL137845.2-201ENST00000444292 988 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC006326.1-201ENST00000445465 787 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 KNOP1P3-201ENST00000446933 426 ntBASIC4.59□□□□□ -1.67
CASP9P55211 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 RHEBP2-201ENST00000450289 600 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP9P55211 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP9P55211 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 RN7SL860P-201ENST00000473738 223 ntBASIC4.59□□□□□ -1.67
CASP9P55211 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP9P55211 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 MRPS33P2-201ENST00000507850 322 ntBASIC4.59□□□□□ -1.67
CASP9P55211 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 AC004923.2-201ENST00000529649 369 ntBASIC4.59□□□□□ -1.67
CASP9P55211 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP9P55211 POLR2KP1-201ENST00000553226 168 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC106785.3-201ENST00000564064 847 ntBASIC4.59□□□□□ -1.67
CASP9P55211 MIR3936-201ENST00000584304 110 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC011447.4-201ENST00000587562 111 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP9P55211 TAS2R6P-201ENST00000605022 826 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP9P55211 AC015804.1-201ENST00000622935 435 ntBASIC4.59□□□□□ -1.67
CASP9P55211 AL356490.1-201ENST00000623079 479 ntBASIC4.59□□□□□ -1.67
CASP9P55211 Z73965.1-201ENST00000623412 2297 ntBASIC4.59□□□□□ -1.67
CASP9P55211 NEAT1-202ENST00000501122 22743 ntBASIC4.59□□□□□ -1.67
CASP9P55211 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CASP9P55211 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CASP9P55211 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CASP9P55211 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.58□□□□□ -1.68
CASP9P55211 USP9YP4-201ENST00000424401 1745 ntBASIC4.58□□□□□ -1.68
CASP9P55211 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CASP9P55211 AL353743.4-201ENST00000422653 1547 ntBASIC4.58□□□□□ -1.68
CASP9P55211 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP9P55211 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP9P55211 AL133268.1-201ENST00000405676 1401 ntBASIC4.58□□□□□ -1.68
CASP9P55211 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP9P55211 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP9P55211 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
CASP9P55211 AC008549.2-201ENST00000333482 706 ntBASIC4.58□□□□□ -1.68
CASP9P55211 RNA5SP428-201ENST00000365129 132 ntBASIC4.58□□□□□ -1.68
CASP9P55211 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP9P55211 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.58□□□□□ -1.68
CASP9P55211 RNU1-106P-201ENST00000384382 164 ntBASIC4.58□□□□□ -1.68
CASP9P55211 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.58□□□□□ -1.68
CASP9P55211 GJA6P-201ENST00000415117 1042 ntBASIC4.58□□□□□ -1.68
CASP9P55211 RBMY2KP-201ENST00000418221 992 ntBASIC4.58□□□□□ -1.68
CASP9P55211 DDX39BP1-205ENST00000422507 192 ntBASIC4.58□□□□□ -1.68
CASP9P55211 EIF4HP2-201ENST00000424380 563 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.58□□□□□ -1.68
CASP9P55211 AC007000.2-201ENST00000442564 487 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC092685.1-201ENST00000447960 1243 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC000111.2-201ENST00000448200 210 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC073850.1-201ENST00000449243 255 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.58□□□□□ -1.68
CASP9P55211 snoU13.20-201ENST00000459180 104 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.58□□□□□ -1.68
CASP9P55211 RN7SL319P-201ENST00000480656 221 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC023050.1-201ENST00000498198 304 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.58□□□□□ -1.68
CASP9P55211 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP9P55211 AC004980.4-201ENST00000513375 203 ntBASIC4.58□□□□□ -1.68
CASP9P55211 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.58□□□□□ -1.68
CASP9P55211 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.58□□□□□ -1.68
CASP9P55211 SNORA31.13-201ENST00000516624 135 ntBASIC4.58□□□□□ -1.68
CASP9P55211 RNA5SP392-201ENST00000516905 112 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms