Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
KRT9P35527 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT9P35527 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
KRT9P35527 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.37□□□□□ -1.55
KRT9P35527 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KRT9P35527 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
KRT9P35527 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
KRT9P35527 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 RPL23P2-201ENST00000320371 421 ntBASIC5.36□□□□□ -1.55
KRT9P35527 RNU6-354P-201ENST00000383862 107 ntBASIC5.36□□□□□ -1.55
KRT9P35527 RNU6-610P-201ENST00000384264 107 ntBASIC5.36□□□□□ -1.55
KRT9P35527 RPL22P22-201ENST00000395439 379 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AP002784.2-201ENST00000397300 549 ntBASIC5.36□□□□□ -1.55
KRT9P35527 RN7SKP229-201ENST00000410465 302 ntBASIC5.36□□□□□ -1.55
KRT9P35527 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.36□□□□□ -1.55
KRT9P35527 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 DYNLL1P7-201ENST00000429273 258 ntBASIC5.36□□□□□ -1.55
KRT9P35527 FABP7P2-201ENST00000429946 379 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.36□□□□□ -1.55
KRT9P35527 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 EIF4A1P11-201ENST00000451239 222 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL035407.2-201ENST00000454090 378 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL445433.1-201ENST00000457507 257 ntBASIC5.36□□□□□ -1.55
KRT9P35527 CCDC75P1-201ENST00000469247 791 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL161747.1-201ENST00000480068 358 ntBASIC5.36□□□□□ -1.55
KRT9P35527 HMGN2P25-201ENST00000486956 268 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 RN7SL244P-201ENST00000493405 297 ntBASIC5.36□□□□□ -1.55
KRT9P35527 NAMPTP2-201ENST00000505629 1115 ntBASIC5.36□□□□□ -1.55
KRT9P35527 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 AC022832.1-201ENST00000530718 645 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AC068339.2-201ENST00000534395 618 ntBASIC5.36□□□□□ -1.55
KRT9P35527 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.36□□□□□ -1.55
KRT9P35527 NMNAT1P1-201ENST00000554095 876 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.36□□□□□ -1.55
KRT9P35527 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 AC027104.1-201ENST00000563702 681 ntBASIC5.36□□□□□ -1.55
KRT9P35527 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 AC115085.1-201ENST00000588924 229 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL355816.1-201ENST00000607951 118 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.36□□□□□ -1.55
KRT9P35527 AC006946.3-201ENST00000609791 756 ntBASIC5.36□□□□□ -1.55
KRT9P35527 STMN1P1-201ENST00000617809 440 ntBASIC5.36□□□□□ -1.55
KRT9P35527 MIR6886-201ENST00000619864 61 ntBASIC5.36□□□□□ -1.55
KRT9P35527 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.36□□□□□ -1.55
KRT9P35527 AL133268.1-201ENST00000405676 1401 ntBASIC5.36□□□□□ -1.55
KRT9P35527 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
KRT9P35527 HSPA8P19-201ENST00000505359 1517 ntBASIC5.36□□□□□ -1.55
KRT9P35527 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
KRT9P35527 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.36□□□□□ -1.55
KRT9P35527 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
KRT9P35527 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
KRT9P35527 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT9P35527 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT9P35527 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT9P35527 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT9P35527 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.35□□□□□ -1.55
KRT9P35527 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
KRT9P35527 ECM1P2-201ENST00000503354 1577 ntBASIC5.35□□□□□ -1.55
KRT9P35527 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRT9P35527 AL590763.1-201ENST00000398297 1545 ntBASIC5.35□□□□□ -1.55
KRT9P35527 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRT9P35527 SNORA66-201ENST00000384792 133 ntBASIC5.35□□□□□ -1.55
KRT9P35527 AC012519.1-201ENST00000424588 610 ntBASIC5.35□□□□□ -1.55
KRT9P35527 MRPL50P1-201ENST00000431951 384 ntBASIC5.35□□□□□ -1.55
KRT9P35527 NMNAT1P2-201ENST00000435192 860 ntBASIC5.35□□□□□ -1.55
KRT9P35527 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT9P35527 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.35□□□□□ -1.55
KRT9P35527 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT9P35527 RPS26P39-201ENST00000469206 341 ntBASIC5.35□□□□□ -1.55
KRT9P35527 AC108751.2-201ENST00000469993 231 ntBASIC5.35□□□□□ -1.55
KRT9P35527 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.35□□□□□ -1.55
KRT9P35527 RN7SL214P-201ENST00000487317 265 ntBASIC5.35□□□□□ -1.55
KRT9P35527 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT9P35527 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT9P35527 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT9P35527 RNU5A-7P-201ENST00000515979 116 ntBASIC5.35□□□□□ -1.55
KRT9P35527 RNA5SP92-201ENST00000516437 110 ntBASIC5.35□□□□□ -1.55
KRT9P35527 SCARNA21.2-201ENST00000516600 166 ntBASIC5.35□□□□□ -1.55
KRT9P35527 AP003355.1-201ENST00000518956 587 ntBASIC5.35□□□□□ -1.55
KRT9P35527 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT9P35527 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT9P35527 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.35□□□□□ -1.55
KRT9P35527 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms