Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RN7SKP222-201ENST00000410651 315 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 FAR1P1-201ENST00000427163 934 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 CYCSP24-201ENST00000445119 316 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC8P31273 AL591363.1-201ENST00000450091 483 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 RNU7-27P-201ENST00000459281 62 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AC011276.1-201ENST00000469688 323 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC8P31273 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC8P31273 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC8P31273 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC8P31273 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC8P31273 AC005868.1-201ENST00000536421 331 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC8P31273 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC8P31273 AC023158.1-201ENST00000561632 1025 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AC005242.1-201ENST00000585658 438 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AL158211.2-201ENST00000607282 395 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AL391834.1-201ENST00000609609 560 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AL121890.3-201ENST00000618494 516 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 AC253576.2-201ENST00000618815 580 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC8P31273 AP000648.2-201ENST00000624182 404 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC8P31273 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC8P31273 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC8P31273 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC8P31273 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC8P31273 AC092451.3-201ENST00000625067 1343 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC8P31273 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC8P31273 MTND4P21-201ENST00000453886 1357 ntBASIC5.16□□□□□ -1.58
HOXC8P31273 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
HOXC8P31273 AL031119.1-201ENST00000404707 1879 ntBASIC5.15□□□□□ -1.58
HOXC8P31273 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXC8P31273 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC8P31273 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HOXC8P31273 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HOXC8P31273 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC8P31273 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC8P31273 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
HOXC8P31273 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC8P31273 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC8P31273 RAD1P1-201ENST00000231383 813 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 RNU6-40P-201ENST00000384254 107 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 MIR320B1-201ENST00000390209 79 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 U3.35-201ENST00000408405 208 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXC8P31273 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 AC013429.2-201ENST00000418798 781 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC8P31273 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC8P31273 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC8P31273 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC8P31273 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 MTND2P25-201ENST00000449028 610 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC8P31273 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 SCARNA10-201ENST00000459255 330 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXC8P31273 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXC8P31273 TOMM20P2-201ENST00000540082 421 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC8P31273 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC8P31273 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC8P31273 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 AL391001.1-201ENST00000602747 715 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 AC073137.1-201ENST00000605636 634 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 AC242628.1-201ENST00000606810 391 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC8P31273 AC108751.5-201ENST00000492880 1336 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
HOXC8P31273 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC8P31273 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC8P31273 AC083899.2-201ENST00000423285 1376 ntBASIC5.15□□□□□ -1.59
HOXC8P31273 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC8P31273 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC8P31273 AC135352.1-201ENST00000506173 1418 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 AL603750.1-201ENST00000624216 1717 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC8P31273 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXC8P31273 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC8P31273 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC8P31273 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC8P31273 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXC8P31273 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HOXC8P31273 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXC8P31273 SDHCP2-201ENST00000398565 501 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 Z86062.1-201ENST00000406773 777 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 AC007738.1-201ENST00000413892 348 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXC8P31273 AL356387.2-201ENST00000422272 243 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 GTF2IP2-201ENST00000424290 697 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 AC004975.1-201ENST00000428733 208 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 RPL17P35-201ENST00000432217 549 ntBASIC5.14□□□□□ -1.59
HOXC8P31273 ZNF965P-201ENST00000432501 817 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms