Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 NXPH1-205ENST00000602349 1953 ntBASIC4.22□□□□□ -1.73
CTNSO60931 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.22□□□□□ -1.73
CTNSO60931 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTNSO60931 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTNSO60931 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTNSO60931 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CTNSO60931 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CTNSO60931 CEACAMP8-201ENST00000413902 580 ntBASIC4.22□□□□□ -1.73
CTNSO60931 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.22□□□□□ -1.73
CTNSO60931 AC062016.2-201ENST00000420950 676 ntBASIC4.22□□□□□ -1.73
CTNSO60931 AC004448.2-201ENST00000422360 586 ntBASIC4.22□□□□□ -1.73
CTNSO60931 RPL7AP25-201ENST00000423357 805 ntBASIC4.22□□□□□ -1.73
CTNSO60931 GTF2IP2-201ENST00000424290 697 ntBASIC4.22□□□□□ -1.73
CTNSO60931 RPEP3-201ENST00000425462 676 ntBASIC4.22□□□□□ -1.73
CTNSO60931 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTNSO60931 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 TXNP2-201ENST00000443918 295 ntBASIC4.22□□□□□ -1.73
CTNSO60931 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.22□□□□□ -1.73
CTNSO60931 AC133473.1-201ENST00000455173 299 ntBASIC4.22□□□□□ -1.73
CTNSO60931 RPL7AP28-201ENST00000464513 571 ntBASIC4.22□□□□□ -1.73
CTNSO60931 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.22□□□□□ -1.73
CTNSO60931 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.22□□□□□ -1.73
CTNSO60931 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 RNA5SP497-201ENST00000516081 97 ntBASIC4.22□□□□□ -1.73
CTNSO60931 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CTNSO60931 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.22□□□□□ -1.73
CTNSO60931 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.22□□□□□ -1.73
CTNSO60931 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTNSO60931 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.22□□□□□ -1.73
CTNSO60931 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 RN7SL176P-201ENST00000580352 264 ntBASIC4.22□□□□□ -1.73
CTNSO60931 RPL12P25-202ENST00000598100 674 ntBASIC4.22□□□□□ -1.73
CTNSO60931 AC091979.2-201ENST00000607514 214 ntBASIC4.22□□□□□ -1.73
CTNSO60931 AC020763.5-201ENST00000623298 430 ntBASIC4.22□□□□□ -1.73
CTNSO60931 AC006065.6-201ENST00000625201 545 ntBASIC4.22□□□□□ -1.73
CTNSO60931 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CTNSO60931 AC139769.1-204ENST00000472297 1931 ntBASIC4.22□□□□□ -1.73
CTNSO60931 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTNSO60931 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.22□□□□□ -1.73
CTNSO60931 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CTNSO60931 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.73
CTNSO60931 AC092435.4-201ENST00000623012 4159 ntBASIC4.21□□□□□ -1.73
CTNSO60931 AC010300.1-201ENST00000600671 5134 ntBASIC4.21□□□□□ -1.73
CTNSO60931 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.21□□□□□ -1.73
CTNSO60931 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.21□□□□□ -1.73
CTNSO60931 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNSO60931 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CTNSO60931 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 RNA5SP372-201ENST00000390836 115 ntBASIC4.21□□□□□ -1.74
CTNSO60931 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CTNSO60931 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNSO60931 RPS27AP7-201ENST00000422792 455 ntBASIC4.21□□□□□ -1.74
CTNSO60931 NPM1P26-201ENST00000426339 738 ntBASIC4.21□□□□□ -1.74
CTNSO60931 CNOT7P1-201ENST00000429006 852 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AC068287.1-201ENST00000430283 295 ntBASIC4.21□□□□□ -1.74
CTNSO60931 HMGB3P10-201ENST00000434734 572 ntBASIC4.21□□□□□ -1.74
CTNSO60931 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNSO60931 MTND2P28-201ENST00000457540 1044 ntBASIC4.21□□□□□ -1.74
CTNSO60931 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNSO60931 AC096741.1-201ENST00000472250 846 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AC083829.1-201ENST00000503756 657 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.21□□□□□ -1.74
CTNSO60931 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNSO60931 ATP5J2P6-201ENST00000565203 266 ntBASIC4.21□□□□□ -1.74
CTNSO60931 MIR4715-201ENST00000584117 79 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNSO60931 RPL7P50-201ENST00000600588 727 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AL137246.1-201ENST00000607072 977 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.21□□□□□ -1.74
CTNSO60931 OR2L1P-202ENST00000641567 1023 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CTNSO60931 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTNSO60931 EOGT-210ENST00000615922 1931 ntBASIC4.21□□□□□ -1.74
CTNSO60931 AP001002.1-201ENST00000625148 1513 ntBASIC4.21□□□□□ -1.74
CTNSO60931 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.21□□□□□ -1.74
CTNSO60931 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
CTNSO60931 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.2□□□□□ -1.74
CTNSO60931 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNSO60931 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTNSO60931 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNSO60931 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.2□□□□□ -1.74
CTNSO60931 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CTNSO60931 RNU1-94P-201ENST00000362627 173 ntBASIC4.2□□□□□ -1.74
CTNSO60931 Y_RNA.62-201ENST00000362840 99 ntBASIC4.2□□□□□ -1.74
CTNSO60931 RNA5SP151-201ENST00000365632 117 ntBASIC4.2□□□□□ -1.74
CTNSO60931 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTNSO60931 RNA5SP146-201ENST00000410743 123 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms