Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRTM2O43300 OR1H1P-201ENST00000448731 937 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 HMGB1P4-201ENST00000455362 567 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.53□□□□□ -1.68
LRRTM2O43300 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.53□□□□□ -1.68
LRRTM2O43300 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
LRRTM2O43300 RNA5SP249-201ENST00000516127 99 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 RNU6-347P-201ENST00000516658 105 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRTM2O43300 AC009643.1-201ENST00000532030 391 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.53□□□□□ -1.68
LRRTM2O43300 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.53□□□□□ -1.68
LRRTM2O43300 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRTM2O43300 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.53□□□□□ -1.68
LRRTM2O43300 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.53□□□□□ -1.68
LRRTM2O43300 AC005520.3-201ENST00000602874 370 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 MTCO2P22-201ENST00000603246 681 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 AP005432.2-201ENST00000608162 586 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 AP001521.2-201ENST00000608772 546 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 AP005131.7-201ENST00000610087 611 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 LINC01109-201ENST00000603837 3081 ntBASIC4.53□□□□□ -1.68
LRRTM2O43300 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LRRTM2O43300 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LRRTM2O43300 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.53□□□□□ -1.69
LRRTM2O43300 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRTM2O43300 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AL358176.3-201ENST00000420757 454 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRTM2O43300 RPL12P28-201ENST00000430852 489 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 RPL7P11-201ENST00000437586 658 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 GEMIN8P3-201ENST00000445417 720 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 RPS15AP29-201ENST00000445539 400 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 IFNWP4-201ENST00000453148 294 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC011005.3-201ENST00000491624 395 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC010627.1-201ENST00000503819 1294 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC010350.1-201ENST00000504908 231 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC097173.1-201ENST00000505862 819 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC111000.3-201ENST00000508057 576 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC026688.1-201ENST00000520639 1168 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRTM2O43300 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC012414.2-201ENST00000559474 187 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC136624.4-201ENST00000573044 370 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRTM2O43300 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRTM2O43300 PSMA6P4-201ENST00000603247 718 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 SNORD91B-202ENST00000608459 222 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 AC006338.2-201ENST00000616864 791 ntBASIC4.52□□□□□ -1.69
LRRTM2O43300 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRTM2O43300 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LRRTM2O43300 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LRRTM2O43300 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LRRTM2O43300 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LRRTM2O43300 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 AC099654.2-201ENST00000433031 1980 ntBASIC4.51□□□□□ -1.69
LRRTM2O43300 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
LRRTM2O43300 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LRRTM2O43300 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LRRTM2O43300 OR52B1P-201ENST00000316506 909 ntBASIC4.51□□□□□ -1.69
LRRTM2O43300 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRTM2O43300 RPS3AP23-201ENST00000401762 784 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms