Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL161912.2-201ENST00000565707 3007 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 TAF9BP1-201ENST00000396646 746 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL161631.1-201ENST00000417933 486 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC073052.1-201ENST00000440417 714 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC010342.1-201ENST00000514047 877 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 OR2L1P-202ENST00000641567 1023 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SCARNA15-201ENST00000607520 4325 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 UG0898H09-202ENST00000623646 7040 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SNORA54-201ENST00000384281 123 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 OR5BE1P-201ENST00000425977 939 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL512326.1-201ENST00000443050 721 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 YWHABP1-201ENST00000445359 727 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 IGHV3-32-201ENST00000519182 355 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 PTS-202ENST00000524931 696 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC015726.1-201ENST00000602353 681 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 OR5BE1P-202ENST00000641168 1176 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LINC01808-202ENST00000641680 1116 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC004158.1-201ENST00000564508 4319 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 TET1P1-201ENST00000426627 2301 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC011504.1-201ENST00000623331 4103 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 OR56B2P-201ENST00000317102 954 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 SNORA9.2-201ENST00000365361 133 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 TRIM36-IT1-201ENST00000503723 881 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RPL19P16-201ENST00000433839 588 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 UBDP1-202ENST00000457888 382 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC080014.1-201ENST00000496877 1201 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC026782.2-201ENST00000510845 636 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AL606490.9-201ENST00000603331 271 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AL121878.1-201ENST00000418638 859 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RPL23AP43-201ENST00000446445 471 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 HPRT1P2-201ENST00000505250 544 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC135352.1-201ENST00000506173 1418 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC021755.1-201ENST00000559747 1447 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RNU6-7-201ENST00000364784 107 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 RNU6-8-201ENST00000365467 107 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AL157831.1-201ENST00000426134 473 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC099063.2-201ENST00000446360 662 ntBASIC1.74□□□□□ -2.13
MACF1Q9UPN3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.74□□□□□ -2.13
MACF1Q9UPN3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms