Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNA5SP28-201ENST00000363841 119 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 GSTM3P2-201ENST00000412746 530 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC006065.1-201ENST00000422539 802 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 EIF1P3-201ENST00000423841 334 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 DHFRP3-201ENST00000455595 559 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC079804.1-201ENST00000461922 436 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 RPL21P126-201ENST00000470049 478 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 OR52A4P-201ENST00000472867 958 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC134698.5-201ENST00000519444 336 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AP001804.2-201ENST00000533932 910 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC024940.4-201ENST00000605507 246 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AL021997.2-201ENST00000615674 271 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC131238.1-201ENST00000617135 328 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AP002967.1-201ENST00000624203 539 ntBASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS29Q9UBQ0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC091046.3-201ENST00000631455 1574 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 RNU1-94P-201ENST00000362627 173 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 SNORD66.1-201ENST00000391230 76 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 RPS24P12-201ENST00000402084 394 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 RPS16P5-201ENST00000406501 404 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 RBMY2KP-201ENST00000418221 992 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC019050.1-201ENST00000418508 492 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AL139095.3-201ENST00000419672 1203 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 RPL7P33-201ENST00000444159 742 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC073587.1-201ENST00000447093 876 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC006499.6-201ENST00000511169 607 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 GLRXP2-201ENST00000555594 321 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 CYP4A43P-201ENST00000568156 121 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC087283.1-201ENST00000604029 1074 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC012409.3-201ENST00000611343 981 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC100827.5-201ENST00000615883 426 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 AC002044.3-201ENST00000623314 541 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS29Q9UBQ0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS29Q9UBQ0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS29Q9UBQ0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
VPS29Q9UBQ0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 OR5P1P-201ENST00000299512 925 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 RNA5SP175-201ENST00000364275 119 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 RNVU1-6-201ENST00000364688 164 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC097374.1-203ENST00000400783 485 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 RPS3AP23-201ENST00000401762 784 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AL512430.2-201ENST00000406786 339 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 TMSB10P2-201ENST00000416049 131 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC073136.2-201ENST00000417282 849 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AL590609.2-201ENST00000421430 368 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AL356387.2-201ENST00000422272 243 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 RPEP3-201ENST00000425462 676 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 RPL7P22-201ENST00000466005 733 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 RPL5P16-201ENST00000471467 790 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms