Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 SLC25A36P1-201ENST00000590111 465 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AL139286.1-201ENST00000604465 483 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 MIR7154-201ENST00000620673 73 ntBASIC4.7□□□□□ -1.66
TRIM4Q9C037 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM4Q9C037 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM4Q9C037 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM4Q9C037 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM4Q9C037 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 RPS3AP23-201ENST00000401762 784 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC01881-201ENST00000416103 412 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 RPS26P28-201ENST00000470806 348 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 RPL12P20-201ENST00000475538 479 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC013356.1-201ENST00000489027 564 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC025445.1-201ENST00000502728 300 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 PRELID3BP7-201ENST00000503606 469 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 PGBD4P4-201ENST00000509673 613 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC021733.2-201ENST00000518830 497 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC023575.1-201ENST00000580510 358 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 MIR4715-201ENST00000584117 79 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC093765.1-201ENST00000603758 881 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC005962.2-201ENST00000611427 652 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AL359922.3-201ENST00000624779 1670 ntBASIC4.69□□□□□ -1.66
TRIM4Q9C037 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM4Q9C037 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM4Q9C037 EOGT-210ENST00000615922 1931 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM4Q9C037 RHOT1P2-201ENST00000366423 333 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 MIR93-201ENST00000385024 80 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 RNA5SP113-201ENST00000410486 84 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 RPL7P57-201ENST00000423238 740 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC073052.1-201ENST00000440417 714 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 AL353748.1-201ENST00000440753 474 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 AL137845.2-201ENST00000444292 988 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM4Q9C037 SNORA84-201ENST00000459229 133 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 RN7SL244P-201ENST00000493405 297 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 OR2A3P-201ENST00000493774 953 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 RNA5SP43-201ENST00000516559 110 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 OR7E128P-201ENST00000532736 1024 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 MIR4429-201ENST00000580105 73 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 ECM1P2-201ENST00000503354 1577 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 SAMMSON-226ENST00000642089 1582 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 USP9YP4-201ENST00000424401 1745 ntBASIC4.68□□□□□ -1.66
TRIM4Q9C037 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM4Q9C037 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM4Q9C037 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 AC009643.2-201ENST00000603543 1448 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM4Q9C037 MIR298-201ENST00000401212 88 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 RNU4-25P-201ENST00000410569 230 ntBASIC4.67□□□□□ -1.66
TRIM4Q9C037 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM4Q9C037 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms