Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 ICE2P1-201ENST00000512800 1849 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 BMS1P3-201ENST00000372011 932 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 RPL7P19-201ENST00000469948 618 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC084824.1-201ENST00000550917 1005 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 ADAD1P2-201ENST00000588476 646 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 BNIP3P33-201ENST00000598912 569 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 AP000843.1-201ENST00000624880 701 ntBASIC5.42□□□□□ -1.54
RPAP1Q9BWH6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 CASC19-255ENST00000641733 1385 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 RNU1-130P-201ENST00000363930 160 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 FCF1P5-201ENST00000406490 482 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AL139095.3-201ENST00000419672 1203 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC011998.1-201ENST00000433403 117 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 RPS3AP54-201ENST00000435535 734 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC122718.1-201ENST00000439448 744 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 RPL23AP93-201ENST00000440847 484 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 RPL23AP43-201ENST00000446445 471 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 FAM133DP-201ENST00000464802 691 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 GOLGA5P1-201ENST00000507317 980 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC010476.1-201ENST00000519111 851 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC007224.1-201ENST00000564410 144 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 AC009950.2-201ENST00000636548 183 ntBASIC5.41□□□□□ -1.54
RPAP1Q9BWH6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPAP1Q9BWH6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.4□□□□□ -1.54
RPAP1Q9BWH6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RPAP1Q9BWH6 Z95327.2-201ENST00000414579 1873 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 RNU1-63P-201ENST00000383902 164 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC009237.10-201ENST00000414112 510 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AL358176.3-201ENST00000420757 454 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 NPM1P48-201ENST00000436002 853 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 CDC27P1-201ENST00000445384 715 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC090151.1-201ENST00000520784 730 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC027455.1-201ENST00000574104 594 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 BNIP3P22-201ENST00000593399 556 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC244517.3-201ENST00000616254 1235 ntBASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RPAP1Q9BWH6 AC100871.1-201ENST00000507871 1456 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 AC090017.1-201ENST00000548612 1779 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 OR5P1P-201ENST00000299512 925 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 RNA5SP366-201ENST00000365454 123 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 MIR23A-201ENST00000385245 73 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 SNORA48.7-201ENST00000391302 135 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 HDGFP1-201ENST00000405943 252 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 AC011933.1-201ENST00000413334 321 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 CEACAMP8-201ENST00000413902 580 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 AC062016.2-201ENST00000420950 676 ntBASIC5.39□□□□□ -1.55
RPAP1Q9BWH6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms