Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 DCAF13P3-201ENST00000561147 1334 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 HMGB3P20-201ENST00000417997 600 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 SNRPEP10-201ENST00000420249 274 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC093698.1-201ENST00000423843 571 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RAB9AP5-201ENST00000437794 597 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 SUMO2P3-201ENST00000438311 288 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RAB9AP2-201ENST00000443911 597 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AL022237.1-201ENST00000446663 358 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 GEMIN2P1-201ENST00000454246 752 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RPS20P20-201ENST00000460498 340 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RPS15AP36-201ENST00000492022 382 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RNU6-277P-201ENST00000516272 106 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RNU6-1225P-201ENST00000516336 65 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RNU6-1046P-201ENST00000516538 107 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 IGKV2-19-201ENST00000518132 283 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC087276.1-201ENST00000529659 480 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 7SK.7-201ENST00000603504 247 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC019193.3-201ENST00000609144 554 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AL355974.3-201ENST00000617383 467 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC007342.8-201ENST00000623278 678 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC079776.5-201ENST00000641920 211 ntBASIC7.89□□□□□ -1.15
RC3H1Q5TC82 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.89□□□□□ -1.15
RC3H1Q5TC82 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 ABCA11P-202ENST00000504019 2110 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 RBPJP7-201ENST00000442803 1447 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 RBPJP5-201ENST00000449433 1447 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC02035-201ENST00000610128 5476 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 Y_RNA.128-201ENST00000363391 112 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 Y_RNA.133-201ENST00000363428 110 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 RNU6-196P-201ENST00000384315 107 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 MIR559-201ENST00000385188 96 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 Y_RNA.598-201ENST00000410480 95 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 RPL35AP3-201ENST00000414680 288 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 TUBB4BP6-201ENST00000437576 479 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 RNU6-1281P-201ENST00000516223 105 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC084337.1-201ENST00000524809 686 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC243972.3-201ENST00000539655 198 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC022404.1-201ENST00000555320 273 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC110588.1-201ENST00000559699 137 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms