Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.93□□□□□ -1.78
UBA52P62987 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.93□□□□□ -1.78
UBA52P62987 MIR4277-201ENST00000578298 84 ntBASIC3.93□□□□□ -1.78
UBA52P62987 AC107993.1-201ENST00000591343 684 ntBASIC3.93□□□□□ -1.78
UBA52P62987 AC093765.1-201ENST00000603758 881 ntBASIC3.93□□□□□ -1.78
UBA52P62987 AC026368.1-201ENST00000614934 690 ntBASIC3.93□□□□□ -1.78
UBA52P62987 AL023881.1-201ENST00000621088 301 ntBASIC3.93□□□□□ -1.78
UBA52P62987 CR381572.2-201ENST00000624852 397 ntBASIC3.93□□□□□ -1.78
UBA52P62987 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.93□□□□□ -1.78
UBA52P62987 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UBA52P62987 DDX18P3-201ENST00000404856 2007 ntBASIC3.93□□□□□ -1.78
UBA52P62987 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.93□□□□□ -1.78
UBA52P62987 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UBA52P62987 DHX40P1-201ENST00000588725 1412 ntBASIC3.93□□□□□ -1.78
UBA52P62987 AC010928.1-201ENST00000592477 1447 ntBASIC3.93□□□□□ -1.78
UBA52P62987 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
UBA52P62987 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBA52P62987 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
UBA52P62987 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UBA52P62987 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.93□□□□□ -1.78
UBA52P62987 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBA52P62987 AL121950.1-201ENST00000624993 2077 ntBASIC3.92□□□□□ -1.78
UBA52P62987 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 AL590240.1-201ENST00000334118 313 ntBASIC3.92□□□□□ -1.78
UBA52P62987 RNA5SP22-201ENST00000365393 109 ntBASIC3.92□□□□□ -1.78
UBA52P62987 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBA52P62987 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 AC114755.2-201ENST00000413520 361 ntBASIC3.92□□□□□ -1.78
UBA52P62987 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.92□□□□□ -1.78
UBA52P62987 YWHAEP5-201ENST00000431545 765 ntBASIC3.92□□□□□ -1.78
UBA52P62987 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
UBA52P62987 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
UBA52P62987 RPL23AP56-201ENST00000460778 453 ntBASIC3.92□□□□□ -1.78
UBA52P62987 SYT14P1-201ENST00000481459 721 ntBASIC3.92□□□□□ -1.78
UBA52P62987 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.92□□□□□ -1.78
UBA52P62987 OR5M7P-201ENST00000526140 972 ntBASIC3.92□□□□□ -1.78
UBA52P62987 CYP4A43P-201ENST00000568156 121 ntBASIC3.92□□□□□ -1.78
UBA52P62987 MIR4715-201ENST00000584117 79 ntBASIC3.92□□□□□ -1.78
UBA52P62987 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.92□□□□□ -1.78
UBA52P62987 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.92□□□□□ -1.78
UBA52P62987 AL139041.1-201ENST00000605480 610 ntBASIC3.92□□□□□ -1.78
UBA52P62987 AL445423.1-201ENST00000609941 536 ntBASIC3.92□□□□□ -1.78
UBA52P62987 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
UBA52P62987 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
UBA52P62987 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.92□□□□□ -1.78
UBA52P62987 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBA52P62987 NCLP2-201ENST00000416078 1462 ntBASIC3.92□□□□□ -1.78
UBA52P62987 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 AC010300.1-201ENST00000600671 5134 ntBASIC3.91□□□□□ -1.78
UBA52P62987 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.91□□□□□ -1.78
UBA52P62987 AC073136.2-201ENST00000417282 849 ntBASIC3.91□□□□□ -1.78
UBA52P62987 OR2B7P-201ENST00000429302 934 ntBASIC3.91□□□□□ -1.78
UBA52P62987 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
UBA52P62987 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.91□□□□□ -1.78
UBA52P62987 AC016831.4-201ENST00000438302 307 ntBASIC3.91□□□□□ -1.78
UBA52P62987 SCAND3P1-201ENST00000439854 1060 ntBASIC3.91□□□□□ -1.78
UBA52P62987 ARL2BPP10-201ENST00000446487 531 ntBASIC3.91□□□□□ -1.78
UBA52P62987 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.91□□□□□ -1.78
UBA52P62987 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.91□□□□□ -1.78
UBA52P62987 PARP4P3-201ENST00000510265 317 ntBASIC3.91□□□□□ -1.78
UBA52P62987 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 AC008966.2-201ENST00000606157 453 ntBASIC3.91□□□□□ -1.78
UBA52P62987 AL031666.3-201ENST00000609320 1006 ntBASIC3.91□□□□□ -1.78
UBA52P62987 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.91□□□□□ -1.78
UBA52P62987 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.91□□□□□ -1.78
UBA52P62987 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
UBA52P62987 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBA52P62987 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.9□□□□□ -1.78
UBA52P62987 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
UBA52P62987 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
UBA52P62987 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
UBA52P62987 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms