Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC007679.3-201ENST00000434035 414 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC122718.1-201ENST00000439448 744 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 VPS25P1-201ENST00000455691 508 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 FAM133DP-201ENST00000464802 691 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC092757.1-201ENST00000467293 467 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC017015.1-201ENST00000477387 286 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC114981.1-201ENST00000503897 678 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 POU5F1P7-201ENST00000508759 541 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.65□□□□□ -1.5
GFRA1P56159 RN7SKP96-201ENST00000516948 297 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 PMS2P3-207ENST00000529061 717 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 OR4A12P-201ENST00000530847 918 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.65□□□□□ -1.5
GFRA1P56159 AP001858.2-201ENST00000536213 601 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GFRA1P56159 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC137800.2-201ENST00000574375 120 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 MIR5186-201ENST00000577504 120 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 GLYATL1P2-202ENST00000588046 902 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 VN1R79P-201ENST00000593540 513 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 AP001823.1-201ENST00000604056 1003 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC090578.1-201ENST00000604955 591 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 IMMP1LP1-201ENST00000605170 488 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC024255.1-201ENST00000614376 102 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC005899.7-201ENST00000618199 588 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
GFRA1P56159 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 AC099654.13-201ENST00000639774 207 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.65□□□□□ -1.51
GFRA1P56159 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
GFRA1P56159 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
GFRA1P56159 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.65□□□□□ -1.51
GFRA1P56159 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA1P56159 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.65□□□□□ -1.51
GFRA1P56159 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
GFRA1P56159 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.65□□□□□ -1.51
GFRA1P56159 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GFRA1P56159 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
GFRA1P56159 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.64□□□□□ -1.51
GFRA1P56159 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 AL033543.1-201ENST00000623440 13454 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GFRA1P56159 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
GFRA1P56159 LCOR-201ENST00000286067 4542 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
GFRA1P56159 RNU1-49P-201ENST00000363468 159 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GFRA1P56159 AL121972.1-201ENST00000402023 252 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 RN7SKP144-201ENST00000411108 279 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 PRELID3BP11-201ENST00000414230 479 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 UBE2V1P14-201ENST00000415815 558 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 CYP4F30P-202ENST00000420048 405 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.64□□□□□ -1.51
GFRA1P56159 VN1R54P-201ENST00000435210 1049 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 PPIAP10-201ENST00000438675 458 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 RPL39P6-201ENST00000448289 150 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 AC092967.1-201ENST00000449016 481 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 RNU6-1218P-201ENST00000458990 108 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC010301.1-201ENST00000473936 355 ntBASIC5.64□□□□□ -1.51
GFRA1P56159 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
GFRA1P56159 AC106872.3-201ENST00000495104 446 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms