Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC010306.1-201ENST00000523223 1117 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.26□□□□□ -1.41
MRE11P49959 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.26□□□□□ -1.41
MRE11P49959 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 AC079075.1-201ENST00000559543 878 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.26□□□□□ -1.41
MRE11P49959 AC022884.2-201ENST00000578535 580 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AP005119.1-201ENST00000580956 292 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC012213.4-201ENST00000606457 354 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC007204.2-201ENST00000615022 616 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC019080.5-201ENST00000624891 757 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC092608.3-201ENST00000625017 386 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 AC008079.2-201ENST00000623543 20396 ntBASIC6.26□□□□□ -1.41
MRE11P49959 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 AL450345.1-202ENST00000605741 3881 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC007382.1-201ENST00000624376 2618 ntBASIC6.25□□□□□ -1.41
MRE11P49959 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.25□□□□□ -1.41
MRE11P49959 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
MRE11P49959 RNA5SP487-201ENST00000410186 122 ntBASIC6.25□□□□□ -1.41
MRE11P49959 OR6C64P-201ENST00000419708 825 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.25□□□□□ -1.41
MRE11P49959 AC000041.1-201ENST00000439655 175 ntBASIC6.25□□□□□ -1.41
MRE11P49959 CNOT7P2-201ENST00000441051 832 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.25□□□□□ -1.41
MRE11P49959 BTF3P6-201ENST00000448054 499 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.25□□□□□ -1.41
MRE11P49959 AL133217.1-201ENST00000450980 425 ntBASIC6.25□□□□□ -1.41
MRE11P49959 RN7SL97P-201ENST00000486780 299 ntBASIC6.25□□□□□ -1.41
MRE11P49959 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 AC034244.1-201ENST00000507687 207 ntBASIC6.25□□□□□ -1.41
MRE11P49959 BTG4P1-201ENST00000510421 183 ntBASIC6.25□□□□□ -1.41
MRE11P49959 OR5BM1P-201ENST00000512021 366 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.25□□□□□ -1.41
MRE11P49959 AC134698.5-201ENST00000519444 336 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.25□□□□□ -1.41
MRE11P49959 OR4A2P-201ENST00000527276 913 ntBASIC6.25□□□□□ -1.41
MRE11P49959 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.25□□□□□ -1.41
MRE11P49959 AC018552.1-201ENST00000562099 811 ntBASIC6.25□□□□□ -1.41
MRE11P49959 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
MRE11P49959 H3F3BP2-201ENST00000583907 357 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.25□□□□□ -1.41
MRE11P49959 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.25□□□□□ -1.41
MRE11P49959 AL035411.2-201ENST00000604022 421 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AP004372.1-201ENST00000604842 844 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AL512329.2-201ENST00000607350 548 ntBASIC6.25□□□□□ -1.41
MRE11P49959 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.25□□□□□ -1.41
MRE11P49959 HULC.1-201ENST00000612720 240 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AL392048.1-201ENST00000613946 534 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC015914.2-201ENST00000618167 288 ntBASIC6.25□□□□□ -1.41
MRE11P49959 BX005214.3-202ENST00000619809 325 ntBASIC6.25□□□□□ -1.41
MRE11P49959 AC073869.7-201ENST00000640874 297 ntBASIC6.25□□□□□ -1.41
MRE11P49959 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.25□□□□□ -1.41
MRE11P49959 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.25□□□□□ -1.41
MRE11P49959 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MRE11P49959 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MRE11P49959 AC104454.1-201ENST00000421341 1401 ntBASIC6.25□□□□□ -1.41
MRE11P49959 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.25□□□□□ -1.41
MRE11P49959 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
MRE11P49959 RN7SKP149-201ENST00000363008 344 ntBASIC6.24□□□□□ -1.41
MRE11P49959 RNU5B-1-201ENST00000363286 116 ntBASIC6.24□□□□□ -1.41
MRE11P49959 BMS1P3-201ENST00000372011 932 ntBASIC6.24□□□□□ -1.41
MRE11P49959 SNORD116-9-201ENST00000384000 95 ntBASIC6.24□□□□□ -1.41
MRE11P49959 SNORD116-3-201ENST00000384287 95 ntBASIC6.24□□□□□ -1.41
MRE11P49959 SNORD116-7-201ENST00000384404 95 ntBASIC6.24□□□□□ -1.41
MRE11P49959 SNORD116-5-201ENST00000384462 95 ntBASIC6.24□□□□□ -1.41
MRE11P49959 RNU6-1005P-201ENST00000384519 107 ntBASIC6.24□□□□□ -1.41
MRE11P49959 OR7E101P-201ENST00000400428 513 ntBASIC6.24□□□□□ -1.41
MRE11P49959 RPS16P5-201ENST00000406501 404 ntBASIC6.24□□□□□ -1.41
MRE11P49959 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.24□□□□□ -1.41
MRE11P49959 RPSAP35-201ENST00000413753 818 ntBASIC6.24□□□□□ -1.41
MRE11P49959 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.24□□□□□ -1.41
MRE11P49959 RPS3AP37-201ENST00000419176 745 ntBASIC6.24□□□□□ -1.41
MRE11P49959 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms