Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNORD116-3-201ENST00000384287 95 ntBASIC4.75□□□□□ -1.65
SOX2P48431 SNORD116-7-201ENST00000384404 95 ntBASIC4.75□□□□□ -1.65
SOX2P48431 SNORD116-5-201ENST00000384462 95 ntBASIC4.75□□□□□ -1.65
SOX2P48431 RNU6-225P-201ENST00000384613 103 ntBASIC4.75□□□□□ -1.65
SOX2P48431 ATP5F1P3-201ENST00000397213 657 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AL590290.1-201ENST00000405336 380 ntBASIC4.75□□□□□ -1.65
SOX2P48431 RPL12P9-201ENST00000412942 488 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 PAICSP7-201ENST00000419829 962 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 USP9YP31-201ENST00000431405 881 ntBASIC4.75□□□□□ -1.65
SOX2P48431 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 RPL21P110-201ENST00000433345 446 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.75□□□□□ -1.65
SOX2P48431 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 YWHAZP7-201ENST00000436906 631 ntBASIC4.75□□□□□ -1.65
SOX2P48431 GSTA7P-201ENST00000438425 448 ntBASIC4.75□□□□□ -1.65
SOX2P48431 MTCYBP34-201ENST00000439552 670 ntBASIC4.75□□□□□ -1.65
SOX2P48431 RPL23AP76-201ENST00000441860 458 ntBASIC4.75□□□□□ -1.65
SOX2P48431 UBE2D3P4-201ENST00000441973 436 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC016772.1-201ENST00000444170 1261 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AC108734.3-201ENST00000481241 1165 ntBASIC4.75□□□□□ -1.65
SOX2P48431 LINC00888-204ENST00000487386 421 ntBASIC4.75□□□□□ -1.65
SOX2P48431 MYL12BP2-201ENST00000503948 512 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC091435.1-201ENST00000505442 584 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC116353.3-201ENST00000511215 249 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC098976.1-201ENST00000513014 541 ntBASIC4.75□□□□□ -1.65
SOX2P48431 HMGB1P23-201ENST00000518743 568 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AC084121.1-201ENST00000533882 835 ntBASIC4.75□□□□□ -1.65
SOX2P48431 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.75□□□□□ -1.65
SOX2P48431 AC122134.1-201ENST00000565664 1104 ntBASIC4.75□□□□□ -1.65
SOX2P48431 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 AC127024.5-201ENST00000580085 462 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC090312.2-201ENST00000582687 378 ntBASIC4.75□□□□□ -1.65
SOX2P48431 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 AC011453.2-201ENST00000603737 729 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC106791.2-201ENST00000604680 391 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.75□□□□□ -1.65
SOX2P48431 AC055764.2-201ENST00000610089 670 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC244107.2-201ENST00000611773 76 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC011939.3-201ENST00000613686 466 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AC010608.2-201ENST00000624830 470 ntBASIC4.75□□□□□ -1.65
SOX2P48431 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 AC087565.3-203ENST00000641018 837 ntBASIC4.75□□□□□ -1.65
SOX2P48431 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX2P48431 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX2P48431 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX2P48431 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AC004817.4-201ENST00000602396 3625 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 RNF6P1-201ENST00000444889 1784 ntBASIC4.74□□□□□ -1.65
SOX2P48431 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 FAM3C2-201ENST00000312214 681 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 RNU1-150P-201ENST00000362491 162 ntBASIC4.74□□□□□ -1.65
SOX2P48431 RN7SKP171-201ENST00000364417 303 ntBASIC4.74□□□□□ -1.65
SOX2P48431 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX2P48431 TAF9BP1-201ENST00000396646 746 ntBASIC4.74□□□□□ -1.65
SOX2P48431 HNRNPDP2-201ENST00000406475 478 ntBASIC4.74□□□□□ -1.65
SOX2P48431 MIR1275-201ENST00000408770 80 ntBASIC4.74□□□□□ -1.65
SOX2P48431 MIR1203-201ENST00000408812 85 ntBASIC4.74□□□□□ -1.65
SOX2P48431 LUZP4P1-201ENST00000415420 344 ntBASIC4.74□□□□□ -1.65
SOX2P48431 QRSL1P2-201ENST00000418582 964 ntBASIC4.74□□□□□ -1.65
SOX2P48431 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.74□□□□□ -1.65
SOX2P48431 AL139421.1-201ENST00000423010 169 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AL593851.1-201ENST00000426171 157 ntBASIC4.74□□□□□ -1.65
SOX2P48431 DPRXP1-201ENST00000426312 460 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AL009174.1-201ENST00000426577 416 ntBASIC4.74□□□□□ -1.65
SOX2P48431 NPM1P22-201ENST00000427761 952 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.74□□□□□ -1.65
SOX2P48431 AL354941.1-201ENST00000438600 464 ntBASIC4.74□□□□□ -1.65
SOX2P48431 USP9YP22-201ENST00000438971 294 ntBASIC4.74□□□□□ -1.65
SOX2P48431 MTND3P1-201ENST00000441336 220 ntBASIC4.74□□□□□ -1.65
SOX2P48431 TIMM8BP2-201ENST00000445940 251 ntBASIC4.74□□□□□ -1.65
SOX2P48431 RPL21P134-201ENST00000453468 483 ntBASIC4.74□□□□□ -1.65
SOX2P48431 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX2P48431 AL109741.2-201ENST00000455561 343 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms