Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 VN1R32P-201ENST00000452234 905 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 RN7SL812P-201ENST00000493791 279 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFSF9P41273 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFSF9P41273 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.71□□□□□ -1.66
TNFSF9P41273 CYCSP29-201ENST00000533731 318 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 AP001804.2-201ENST00000533932 910 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
TNFSF9P41273 AC025423.2-201ENST00000537570 439 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TNFSF9P41273 MIR3939-201ENST00000582614 106 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TNFSF9P41273 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.71□□□□□ -1.66
TNFSF9P41273 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.71□□□□□ -1.66
TNFSF9P41273 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
TNFSF9P41273 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TNFSF9P41273 AL022322.2-201ENST00000624072 20397 ntBASIC4.71□□□□□ -1.66
TNFSF9P41273 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
TNFSF9P41273 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.71□□□□□ -1.66
TNFSF9P41273 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF9P41273 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF9P41273 OR6C69P-201ENST00000394268 893 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 AL078604.1-201ENST00000404609 466 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 RPL23AP26-201ENST00000412728 464 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 TRGV7-201ENST00000427089 353 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 VDAC1P6-201ENST00000430062 855 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF9P41273 ACTR3P2-201ENST00000439585 1257 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF9P41273 PPIAP21-201ENST00000464473 501 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 AC010618.1-201ENST00000469924 477 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 AC108022.1-201ENST00000493466 478 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFSF9P41273 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF9P41273 RN7SKP34-201ENST00000516142 244 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.7□□□□□ -1.66
TNFSF9P41273 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AC020910.2-201ENST00000603635 610 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 AL445567.2-201ENST00000618935 498 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AP003400.2-201ENST00000624036 666 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.7□□□□□ -1.66
TNFSF9P41273 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AP001284.1-201ENST00000528393 2118 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 MFSD8-220ENST00000641243 1422 ntBASIC4.7□□□□□ -1.66
TNFSF9P41273 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TNFSF9P41273 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TNFSF9P41273 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TNFSF9P41273 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF9P41273 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TNFSF9P41273 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF9P41273 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFSF9P41273 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.69□□□□□ -1.66
TNFSF9P41273 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.69□□□□□ -1.66
TNFSF9P41273 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.69□□□□□ -1.66
TNFSF9P41273 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.69□□□□□ -1.66
TNFSF9P41273 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF9P41273 RNU6-1331P-201ENST00000363658 106 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 RNA5SP175-201ENST00000364275 119 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 RNA5SP479-201ENST00000364858 117 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 RNA5SP366-201ENST00000365454 123 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF9P41273 ST13P16-201ENST00000401760 781 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.69□□□□□ -1.66
TNFSF9P41273 RNA5SP36-201ENST00000410197 133 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF9P41273 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.69□□□□□ -1.66
TNFSF9P41273 AL157831.1-201ENST00000426134 473 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TNFSF9P41273 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFSF9P41273 OR52Y1P-201ENST00000452418 828 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
TNFSF9P41273 AC091167.1-201ENST00000492017 396 ntBASIC4.69□□□□□ -1.66
TNFSF9P41273 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.69□□□□□ -1.66
TNFSF9P41273 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms