Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.73□□□□□ -1.81
COL8A2P25067 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.73□□□□□ -1.81
COL8A2P25067 AC084759.1-201ENST00000561168 290 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 ATP5J2P6-201ENST00000565203 266 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.73□□□□□ -1.81
COL8A2P25067 ADAM3B-201ENST00000569937 840 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 SS18L2P2-201ENST00000583960 235 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 AC091178.1-203ENST00000584586 279 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 IPO5P1-202ENST00000600039 287 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 AC023762.1-201ENST00000603280 584 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 AC103792.1-201ENST00000603591 919 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 MIR6716-201ENST00000613413 80 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.73□□□□□ -1.81
COL8A2P25067 uc_338.13-201ENST00000618243 179 ntBASIC3.73□□□□□ -1.81
COL8A2P25067 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.73□□□□□ -1.81
COL8A2P25067 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL8A2P25067 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.73□□□□□ -1.81
COL8A2P25067 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL8A2P25067 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.73□□□□□ -1.81
COL8A2P25067 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.73□□□□□ -1.81
COL8A2P25067 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL8A2P25067 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 AC026951.1-201ENST00000559530 2459 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 MAPK10-320ENST00000641462 6696 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.72□□□□□ -1.81
COL8A2P25067 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.72□□□□□ -1.81
COL8A2P25067 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 RNU1-132P-201ENST00000364300 164 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL8A2P25067 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 SNORA11F-201ENST00000408237 128 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 RNU2-22P-201ENST00000411266 212 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 NRBF2P2-201ENST00000413087 861 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.72□□□□□ -1.81
COL8A2P25067 RPL21P91-201ENST00000429231 479 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 RPS3AP54-201ENST00000435535 734 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 UBE2V1P3-201ENST00000439651 417 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC105137.1-201ENST00000484355 562 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.72□□□□□ -1.81
COL8A2P25067 ATP1B1P1-201ENST00000509767 915 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 PARP4P3-201ENST00000510265 317 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 RNA5SP360-201ENST00000516555 118 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC138701.1-201ENST00000524329 714 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.72□□□□□ -1.81
COL8A2P25067 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
COL8A2P25067 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC011477.5-201ENST00000586571 259 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 AC090181.2-201ENST00000602975 672 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 AC113403.1-201ENST00000604910 193 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 AL137246.1-201ENST00000607072 977 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 RNU6-84P-201ENST00000607737 102 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 AC091905.2-201ENST00000623143 306 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL8A2P25067 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 MTCO1P22-201ENST00000604619 1360 ntBASIC3.72□□□□□ -1.81
COL8A2P25067 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL8A2P25067 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
COL8A2P25067 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.72□□□□□ -1.81
COL8A2P25067 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
COL8A2P25067 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
COL8A2P25067 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.71□□□□□ -1.81
COL8A2P25067 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COL8A2P25067 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COL8A2P25067 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.71□□□□□ -1.81
COL8A2P25067 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COL8A2P25067 OR51C1P-202ENST00000641159 1444 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL8A2P25067 NEAT1-202ENST00000501122 22743 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL8A2P25067 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL8A2P25067 CASC19-204ENST00000641001 2055 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL8A2P25067 AC027228.2-201ENST00000567141 2154 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 RNA5SP151-201ENST00000365632 117 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 RNU1-63P-201ENST00000383902 164 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.71□□□□□ -1.82
COL8A2P25067 ST13P16-201ENST00000401760 781 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 RPL23AP26-201ENST00000412728 464 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.71□□□□□ -1.82
COL8A2P25067 Z74021.1-201ENST00000423610 407 ntBASIC3.71□□□□□ -1.82
COL8A2P25067 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.71□□□□□ -1.82
COL8A2P25067 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.71□□□□□ -1.82
COL8A2P25067 RPL23AP25-201ENST00000430973 463 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms