Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FAR2P4-202ENST00000425399 584 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC073587.1-201ENST00000447093 876 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 TPT1P13-201ENST00000449760 499 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 CEACAMP6-201ENST00000452007 574 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC079168.2-201ENST00000453977 416 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.59□□□□□ -1.67
XRCC1P18887 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 NDUFA12P1-201ENST00000455914 406 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
XRCC1P18887 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 ATP5G1P3-201ENST00000463301 410 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 STMN1P2-201ENST00000508435 439 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 SNORA48.9-201ENST00000516419 162 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.59□□□□□ -1.67
XRCC1P18887 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 CYCSP28-201ENST00000534284 321 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 FKBP1BP1-201ENST00000553366 325 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC122134.1-201ENST00000565664 1104 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 SLC25A36P1-201ENST00000590111 465 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC005520.3-201ENST00000602874 370 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC096553.1-201ENST00000605169 829 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 AL359757.1-201ENST00000623176 255 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.59□□□□□ -1.68
XRCC1P18887 LINC01109-201ENST00000603837 3081 ntBASIC4.59□□□□□ -1.68
XRCC1P18887 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.59□□□□□ -1.68
XRCC1P18887 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
XRCC1P18887 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 AL121950.1-201ENST00000624993 2077 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 HSPD1P14-201ENST00000432666 1618 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.58□□□□□ -1.68
XRCC1P18887 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 RNA5SP397-201ENST00000391323 118 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 OR51B3P-201ENST00000412287 913 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.58□□□□□ -1.68
XRCC1P18887 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 AC104629.2-201ENST00000468627 598 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AC025164.1-201ENST00000496249 478 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.58□□□□□ -1.68
XRCC1P18887 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.58□□□□□ -1.68
XRCC1P18887 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.58□□□□□ -1.68
XRCC1P18887 RN7SKP92-201ENST00000517266 244 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AC104997.1-201ENST00000519761 717 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 AC015912.2-201ENST00000571053 181 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 AC073091.2-201ENST00000603205 907 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AL135786.2-201ENST00000608422 615 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AC084036.1-201ENST00000609190 508 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AC004241.3-201ENST00000611728 517 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.58□□□□□ -1.68
XRCC1P18887 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.58□□□□□ -1.68
XRCC1P18887 MIR7641-1-201ENST00000627518 61 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 AC125257.1-201ENST00000560400 2930 ntBASIC4.58□□□□□ -1.68
XRCC1P18887 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
XRCC1P18887 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
XRCC1P18887 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
XRCC1P18887 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.57□□□□□ -1.68
XRCC1P18887 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 DDX18P3-201ENST00000404856 2007 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 RNU4-7P-201ENST00000364758 141 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 AL512504.1-201ENST00000415494 778 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AL807761.1-201ENST00000417622 171 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 AC068287.1-201ENST00000430283 295 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 NDUFA5P1-201ENST00000433858 341 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 HMGB3P9-201ENST00000441799 583 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AC104651.2-201ENST00000447549 528 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AL157884.3-201ENST00000448273 1184 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 NPM1P39-201ENST00000449818 867 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms