Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 AL359922.2-201ENST00000581788 3017 ntBASIC6.59□□□□□ -1.35
SOX1O00570 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX1O00570 OR4K15-201ENST00000305051 1216 ntBASIC6.59□□□□□ -1.35
SOX1O00570 RNU6-433P-201ENST00000363216 104 ntBASIC6.59□□□□□ -1.35
SOX1O00570 Y_RNA.160-201ENST00000363677 92 ntBASIC6.59□□□□□ -1.35
SOX1O00570 Y_RNA.295-201ENST00000364918 102 ntBASIC6.59□□□□□ -1.35
SOX1O00570 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SOX1O00570 RNU6-185P-201ENST00000384421 107 ntBASIC6.59□□□□□ -1.35
SOX1O00570 MIR765-201ENST00000390226 114 ntBASIC6.59□□□□□ -1.35
SOX1O00570 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX1O00570 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX1O00570 AC007559.1-201ENST00000428736 355 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX1O00570 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX1O00570 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX1O00570 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX1O00570 MTND1P18-201ENST00000448191 573 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AC104306.1-201ENST00000449702 371 ntBASIC6.59□□□□□ -1.35
SOX1O00570 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.59□□□□□ -1.35
SOX1O00570 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX1O00570 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 RN7SL222P-201ENST00000476452 299 ntBASIC6.59□□□□□ -1.35
SOX1O00570 RN7SL97P-201ENST00000486780 299 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AC072052.1-201ENST00000496556 306 ntBASIC6.59□□□□□ -1.35
SOX1O00570 NDUFB4P2-201ENST00000509515 391 ntBASIC6.59□□□□□ -1.35
SOX1O00570 RNU6-1153P-201ENST00000516760 105 ntBASIC6.59□□□□□ -1.35
SOX1O00570 RNU6-430P-201ENST00000517078 107 ntBASIC6.59□□□□□ -1.35
SOX1O00570 IGHV3-63-201ENST00000518422 341 ntBASIC6.59□□□□□ -1.35
SOX1O00570 OR4A45P-201ENST00000529954 901 ntBASIC6.59□□□□□ -1.35
SOX1O00570 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX1O00570 AC137800.2-201ENST00000574375 120 ntBASIC6.59□□□□□ -1.35
SOX1O00570 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 KPNA2P3-201ENST00000584190 848 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AC060780.3-201ENST00000589464 80 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.59□□□□□ -1.35
SOX1O00570 AC087763.1-201ENST00000603391 286 ntBASIC6.59□□□□□ -1.35
SOX1O00570 TAS2R6P-201ENST00000605022 826 ntBASIC6.59□□□□□ -1.35
SOX1O00570 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 AL354718.1-201ENST00000619764 589 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AC136475.10-201ENST00000620253 385 ntBASIC6.59□□□□□ -1.35
SOX1O00570 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SOX1O00570 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.59□□□□□ -1.35
SOX1O00570 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.59□□□□□ -1.35
SOX1O00570 AC110716.2-201ENST00000563865 3945 ntBASIC6.59□□□□□ -1.35
SOX1O00570 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SOX1O00570 AL117339.4-201ENST00000608335 7063 ntBASIC6.59□□□□□ -1.36
SOX1O00570 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
SOX1O00570 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SOX1O00570 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
SOX1O00570 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.59□□□□□ -1.36
SOX1O00570 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SOX1O00570 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.59□□□□□ -1.36
SOX1O00570 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 AC034111.1-201ENST00000562143 3770 ntBASIC6.58□□□□□ -1.36
SOX1O00570 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX1O00570 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX1O00570 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.58□□□□□ -1.36
SOX1O00570 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 CALM2P3-201ENST00000400429 449 ntBASIC6.58□□□□□ -1.36
SOX1O00570 Y_RNA.598-201ENST00000410480 95 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.58□□□□□ -1.36
SOX1O00570 FABP7P1-201ENST00000424004 391 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AC073464.1-201ENST00000429823 534 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 AC006466.1-201ENST00000438721 289 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 TPT1P13-201ENST00000449760 499 ntBASIC6.58□□□□□ -1.36
SOX1O00570 OR52A4P-201ENST00000472867 958 ntBASIC6.58□□□□□ -1.36
SOX1O00570 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 HMGN2P25-201ENST00000486956 268 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms