Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL137072.1-201ENST00000603444 466 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AL121932.1-201ENST00000605542 214 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AC090912.3-201ENST00000609775 533 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 FAM27B-201ENST00000610601 213 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AC005156.1-201ENST00000613371 573 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AL645927.2-201ENST00000618350 349 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AC091046.2-201ENST00000620775 665 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 OR4G3P-201ENST00000633500 913 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AC000374.1-201ENST00000434698 1745 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 MAPK10-263ENST00000641052 4307 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 NCLP2-201ENST00000416078 1462 ntBASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SNX9Q9Y5X1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC017002.4-201ENST00000604721 1525 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 MTCO1P4-201ENST00000520516 1409 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 RNU4-7P-201ENST00000364758 141 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC104333.2-201ENST00000422630 192 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC073310.1-201ENST00000423226 1033 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC093084.1-201ENST00000424233 687 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 USP9YP9-201ENST00000429406 715 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 RN7SL558P-201ENST00000497468 299 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 HAUS1P1-201ENST00000505275 832 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC109635.6-201ENST00000525487 1113 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC133555.2-201ENST00000550213 292 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 SULT1C2P2-201ENST00000562517 294 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AC091042.1-201ENST00000579213 173 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 MTATP6P2-201ENST00000603319 678 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AL391358.1-201ENST00000605342 190 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AL050303.3-201ENST00000613704 284 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 AL356118.1-201ENST00000635272 1078 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 MAPK10-349ENST00000641767 3661 ntBASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.18□□□□□ -1.58
SNX9Q9Y5X1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AL121950.1-201ENST00000624993 2077 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC100778.3-201ENST00000580060 1750 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 CASC19-261ENST00000641853 1638 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 BMS1P3-201ENST00000372011 932 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 RNU6-1257P-201ENST00000384625 110 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 ATP5F1P6-201ENST00000402768 767 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 RN7SKP100-201ENST00000411258 284 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC012519.1-201ENST00000424588 610 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 NRBF2P3-201ENST00000432731 865 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 MTND2P21-201ENST00000436242 1042 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AP000936.3-201ENST00000438127 255 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 CCRL1P1-201ENST00000449542 1053 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC093770.1-201ENST00000511559 571 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC016550.3-201ENST00000515706 767 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms