Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC090506.2-201ENST00000624521 419 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5□□□□□ -1.61
PCDH9Q9HC56 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 AP000542.2-201ENST00000623199 6179 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 TMEM161BP1-201ENST00000457388 1457 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC104260.2-201ENST00000623551 3497 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 RN7SKP95-201ENST00000362860 303 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 RNA5SP123-201ENST00000363244 119 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AL589647.1-201ENST00000402485 466 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AL158050.1-201ENST00000416077 457 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 BTF3P9-201ENST00000418784 283 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC013262.1-201ENST00000426710 252 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 RPS27P18-201ENST00000431701 247 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC004938.1-201ENST00000438468 308 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 TRY2P-201ENST00000448860 689 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 NPM1P39-201ENST00000449818 867 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 RPL7P55-201ENST00000450522 746 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 RN7SL558P-201ENST00000497468 299 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 MRPS33P2-201ENST00000507850 322 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC121161.1-201ENST00000510606 652 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC110775.1-201ENST00000513721 462 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AL158211.1-201ENST00000566763 763 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC096553.1-201ENST00000605169 829 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 SNORD91B-202ENST00000608459 222 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AL353662.3-201ENST00000625131 237 ntBASIC4.99□□□□□ -1.61
PCDH9Q9HC56 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDH9Q9HC56 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 RBPJP2-201ENST00000618187 1444 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 TATDN1P1-201ENST00000414123 891 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 CHEK2P3-201ENST00000416118 248 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL606495.1-201ENST00000422100 813 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 PRPF38AP2-201ENST00000438179 851 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 RPS26P2-201ENST00000440331 348 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC108729.1-201ENST00000487812 947 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms