Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AC245505.1-201ENST00000556398 224 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AL133338.2-201ENST00000604292 736 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 MIR6778-201ENST00000617912 73 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AL139089.1-201ENST00000620372 975 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AC069234.4-201ENST00000621276 412 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AC015908.5-201ENST00000623289 343 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AC027514.1-201ENST00000588561 1603 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 AP000432.2-201ENST00000624164 2048 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 STX3-208ENST00000641815 3236 ntBASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
TRAIPQ9BWF2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RN7SKP15-201ENST00000364742 309 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 U8.14-201ENST00000390843 143 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC016769.3-201ENST00000396562 315 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 SNORA11.3-201ENST00000408471 128 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AF274854.1-201ENST00000413236 615 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 OSTCP4-201ENST00000424397 449 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC003989.1-201ENST00000434569 565 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 NDUFS5P5-201ENST00000437256 321 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 TUBB4BP6-201ENST00000437576 479 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RPL12P11-201ENST00000439970 501 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RPL7P31-201ENST00000450192 724 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC144530.1-201ENST00000452862 555 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 Z83838.1-202ENST00000456225 839 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RN7SL254P-201ENST00000460609 284 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RN7SL643P-201ENST00000471845 291 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 FTH1P8-201ENST00000498161 514 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 MAST4-IT1-201ENST00000514241 658 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RNU6-405P-201ENST00000516637 110 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC104986.1-201ENST00000517978 436 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC022861.1-201ENST00000522981 663 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 CYCSP38-201ENST00000559840 322 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 MIR548AB-201ENST00000584917 84 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC005771.1-201ENST00000585581 349 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 BBIP1P1-201ENST00000602999 279 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 TAS2R6P-201ENST00000605022 826 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AC007786.3-201ENST00000615154 596 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 SNORA11.6-201ENST00000619030 128 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AP001264.1-201ENST00000620602 703 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 SAMMSON-213ENST00000641336 1521 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 AP002370.1-201ENST00000528055 1602 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 TNPO1P2-201ENST00000426249 2665 ntBASIC7.04□□□□□ -1.28
TRAIPQ9BWF2 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AL122126.1-201ENST00000546905 1318 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 ERCC6-202ENST00000374127 1782 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC022164.1-201ENST00000568767 2673 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms