Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SAMMSON-213ENST00000641336 1521 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 Y_RNA.187-201ENST00000363918 113 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RN7SKP15-201ENST00000364742 309 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RN7SKP6-201ENST00000364795 319 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 Y_RNA.447-201ENST00000384184 113 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 CYCSP17-201ENST00000407870 315 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RNA5SP431-201ENST00000410312 120 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RNA5SP115-201ENST00000411160 107 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC244452.1-201ENST00000413798 141 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AL356968.1-201ENST00000416622 474 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AL049734.2-201ENST00000441066 616 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC002486.2-201ENST00000447806 590 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC104058.1-201ENST00000448028 297 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RPL7P15-201ENST00000461190 712 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC135721.2-201ENST00000464237 300 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC083798.1-201ENST00000472671 131 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 H3F3AP5-201ENST00000475267 429 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC055733.3-201ENST00000505214 523 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC011352.2-201ENST00000514574 1016 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RNY4P37-201ENST00000516225 96 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 Y_RNA.668-201ENST00000516233 93 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RNU6-445P-201ENST00000516949 107 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 EEF1B2P2-201ENST00000519625 676 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 NIFKP8-201ENST00000560500 874 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 MIR548AI-201ENST00000579940 88 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 CTSLP2-201ENST00000580501 394 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC114477.1-201ENST00000605097 605 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 MIR6721-201ENST00000617181 87 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 MIR7854-201ENST00000620068 65 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AL162373.1-201ENST00000620433 407 ntBASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NPAS3Q8IXF0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ASNSP6-201ENST00000592770 1618 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC011755.1-201ENST00000623763 2049 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 AC138915.4-201ENST00000565549 4147 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 API5P2-201ENST00000397055 1498 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 CDR1-202ENST00000625883 1485 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RNU6-99P-201ENST00000364721 107 ntBASIC7.01□□□□□ -1.29
NPAS3Q8IXF0 RN7SKP269-201ENST00000365545 319 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms