Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.46□□□□□ -1.06
ATN1P54259 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC8.46□□□□□ -1.06
ATN1P54259 PRMT5P1-201ENST00000514351 598 ntBASIC8.46□□□□□ -1.06
ATN1P54259 AP003497.1-201ENST00000528472 562 ntBASIC8.46□□□□□ -1.06
ATN1P54259 DEFB109D-201ENST00000529497 240 ntBASIC8.46□□□□□ -1.06
ATN1P54259 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.46□□□□□ -1.06
ATN1P54259 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.46□□□□□ -1.06
ATN1P54259 AC089984.3-201ENST00000552838 363 ntBASIC8.46□□□□□ -1.06
ATN1P54259 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC8.46□□□□□ -1.06
ATN1P54259 RN7SL426P-201ENST00000579106 295 ntBASIC8.46□□□□□ -1.06
ATN1P54259 MIR3144-201ENST00000579460 79 ntBASIC8.46□□□□□ -1.06
ATN1P54259 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.46□□□□□ -1.06
ATN1P54259 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.46□□□□□ -1.06
ATN1P54259 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 AC011494.1-201ENST00000596454 237 ntBASIC8.46□□□□□ -1.06
ATN1P54259 AL355877.2-201ENST00000603670 358 ntBASIC8.46□□□□□ -1.06
ATN1P54259 AC048344.3-201ENST00000605512 251 ntBASIC8.46□□□□□ -1.06
ATN1P54259 HMGN2P28-201ENST00000606102 262 ntBASIC8.46□□□□□ -1.06
ATN1P54259 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 AC103705.1-201ENST00000619013 241 ntBASIC8.46□□□□□ -1.06
ATN1P54259 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 AL159153.1-201ENST00000619688 317 ntBASIC8.46□□□□□ -1.06
ATN1P54259 uc_338.37-201ENST00000620113 186 ntBASIC8.46□□□□□ -1.06
ATN1P54259 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 AL161912.4-201ENST00000623889 2468 ntBASIC8.46□□□□□ -1.06
ATN1P54259 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
ATN1P54259 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
ATN1P54259 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.46□□□□□ -1.06
ATN1P54259 EXOC7P1-201ENST00000509881 2059 ntBASIC8.45□□□□□ -1.06
ATN1P54259 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.45□□□□□ -1.06
ATN1P54259 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 Y_RNA.48-201ENST00000362710 103 ntBASIC8.45□□□□□ -1.06
ATN1P54259 RNU6-1078P-201ENST00000364522 103 ntBASIC8.45□□□□□ -1.06
ATN1P54259 RNU2-28P-201ENST00000410457 189 ntBASIC8.45□□□□□ -1.06
ATN1P54259 RNU4-78P-201ENST00000410940 126 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AC096664.2-201ENST00000411843 406 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AL355862.1-201ENST00000412705 353 ntBASIC8.45□□□□□ -1.06
ATN1P54259 RPS6P23-201ENST00000413224 722 ntBASIC8.45□□□□□ -1.06
ATN1P54259 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC8.45□□□□□ -1.06
ATN1P54259 BMS1P22-201ENST00000414726 313 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC8.45□□□□□ -1.06
ATN1P54259 AL445305.1-201ENST00000432577 575 ntBASIC8.45□□□□□ -1.06
ATN1P54259 ANXA2P2-201ENST00000435128 1020 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.45□□□□□ -1.06
ATN1P54259 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.45□□□□□ -1.06
ATN1P54259 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.45□□□□□ -1.06
ATN1P54259 RN7SL251P-201ENST00000464175 297 ntBASIC8.45□□□□□ -1.06
ATN1P54259 RN7SL790P-201ENST00000474043 298 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AC009153.1-201ENST00000485799 496 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AC011005.3-201ENST00000491624 395 ntBASIC8.45□□□□□ -1.06
ATN1P54259 SNRPCP11-201ENST00000492453 205 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AC008040.4-201ENST00000494834 768 ntBASIC8.45□□□□□ -1.06
ATN1P54259 RN7SL388P-201ENST00000498736 339 ntBASIC8.45□□□□□ -1.06
ATN1P54259 CHCHD2P7-201ENST00000508008 452 ntBASIC8.45□□□□□ -1.06
ATN1P54259 MTND6P19-201ENST00000519399 524 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC8.45□□□□□ -1.06
ATN1P54259 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC8.45□□□□□ -1.06
ATN1P54259 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.45□□□□□ -1.06
ATN1P54259 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC8.45□□□□□ -1.06
ATN1P54259 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.45□□□□□ -1.06
ATN1P54259 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.45□□□□□ -1.06
ATN1P54259 AC004584.2-201ENST00000570407 410 ntBASIC8.45□□□□□ -1.06
ATN1P54259 MIR3146-201ENST00000580367 79 ntBASIC8.45□□□□□ -1.06
ATN1P54259 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.45□□□□□ -1.06
ATN1P54259 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.45□□□□□ -1.06
ATN1P54259 Z83818.1-201ENST00000603584 150 ntBASIC8.45□□□□□ -1.06
ATN1P54259 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.45□□□□□ -1.06
ATN1P54259 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.45□□□□□ -1.06
ATN1P54259 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 AC087045.3-201ENST00000623046 2468 ntBASIC8.45□□□□□ -1.06
ATN1P54259 MAPK10-333ENST00000641607 2481 ntBASIC8.45□□□□□ -1.06
ATN1P54259 AL355974.1-201ENST00000618896 1708 ntBASIC8.45□□□□□ -1.06
ATN1P54259 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 AL357556.1-201ENST00000421884 1388 ntBASIC8.45□□□□□ -1.06
ATN1P54259 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
ATN1P54259 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.45□□□□□ -1.06
ATN1P54259 AL161891.1-201ENST00000621575 4636 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms