Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF2A1P52655 RPL23AP14-201ENST00000468281 468 ntBASIC4.35□□□□□ -1.71
GTF2A1P52655 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AP000893.1-201ENST00000474462 794 ntBASIC4.35□□□□□ -1.71
GTF2A1P52655 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
GTF2A1P52655 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.35□□□□□ -1.71
GTF2A1P52655 DUX4L52-201ENST00000549363 777 ntBASIC4.35□□□□□ -1.71
GTF2A1P52655 AC092653.1-201ENST00000608509 531 ntBASIC4.35□□□□□ -1.71
GTF2A1P52655 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AL049794.2-201ENST00000616301 365 ntBASIC4.35□□□□□ -1.71
GTF2A1P52655 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF2A1P52655 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF2A1P52655 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.35□□□□□ -1.71
GTF2A1P52655 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.35□□□□□ -1.71
GTF2A1P52655 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
GTF2A1P52655 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GTF2A1P52655 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GTF2A1P52655 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
GTF2A1P52655 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GTF2A1P52655 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
GTF2A1P52655 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GTF2A1P52655 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
GTF2A1P52655 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.34□□□□□ -1.71
GTF2A1P52655 AC127526.1-201ENST00000417526 366 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 RPL23AP19-201ENST00000436229 369 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 IGHV5-78-201ENST00000450948 295 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC007386.1-201ENST00000455212 582 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC084754.1-201ENST00000463466 464 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC009127.1-201ENST00000467090 155 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 RN7SL329P-201ENST00000467740 299 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 AC021733.2-201ENST00000518830 497 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.34□□□□□ -1.71
GTF2A1P52655 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.34□□□□□ -1.71
GTF2A1P52655 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.34□□□□□ -1.71
GTF2A1P52655 MIR4271-201ENST00000582451 67 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC020910.2-201ENST00000603635 610 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AL592436.1-201ENST00000605135 558 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 RNA5SP440-201ENST00000612665 119 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC087821.1-201ENST00000623639 567 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC136428.4-201ENST00000634254 1155 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 NR1H5P-201ENST00000452683 1377 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 AC090017.1-201ENST00000548612 1779 ntBASIC4.34□□□□□ -1.71
GTF2A1P52655 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GTF2A1P52655 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GTF2A1P52655 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GTF2A1P52655 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.33□□□□□ -1.72
GTF2A1P52655 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
GTF2A1P52655 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
GTF2A1P52655 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 RNA5SP428-201ENST00000365129 132 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.33□□□□□ -1.72
GTF2A1P52655 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
GTF2A1P52655 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.33□□□□□ -1.72
GTF2A1P52655 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.33□□□□□ -1.72
GTF2A1P52655 HMGB3P8-201ENST00000449709 577 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.33□□□□□ -1.72
GTF2A1P52655 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.33□□□□□ -1.72
GTF2A1P52655 RN7SL93P-201ENST00000463035 293 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 RN7SL738P-201ENST00000470264 297 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 OR2A3P-201ENST00000493774 953 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.33□□□□□ -1.72
GTF2A1P52655 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
GTF2A1P52655 AC024405.1-201ENST00000532521 1042 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.33□□□□□ -1.72
GTF2A1P52655 AC022404.1-201ENST00000555320 273 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 SNORA74C-1-201ENST00000580726 201 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 AC005726.4-201ENST00000582858 458 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.33□□□□□ -1.72
GTF2A1P52655 AC103792.1-201ENST00000603591 919 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 AC090527.3-201ENST00000619041 548 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 AC008785.1-201ENST00000624475 456 ntBASIC4.33□□□□□ -1.72
GTF2A1P52655 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.33□□□□□ -1.72
GTF2A1P52655 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GTF2A1P52655 AC009452.1-201ENST00000640823 606 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms