Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.21□□□□□ -1.9
UBE2AP49459 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBE2AP49459 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBE2AP49459 AC006971.1-201ENST00000407916 4486 ntBASIC3.21□□□□□ -1.9
UBE2AP49459 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.2□□□□□ -1.9
UBE2AP49459 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
UBE2AP49459 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 AC006210.2-201ENST00000367074 1545 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL451142.2-201ENST00000429076 2090 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBE2AP49459 RNA5SP90-201ENST00000364801 99 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RNA5SP339-201ENST00000390987 122 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 OR4K12P-201ENST00000406538 961 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL603766.1-201ENST00000407763 664 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 COX6CP13-201ENST00000428703 226 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RPL12P28-201ENST00000430852 489 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RPL7L1P9-201ENST00000431298 745 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.2□□□□□ -1.9
UBE2AP49459 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC3.2□□□□□ -1.9
UBE2AP49459 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 YWHAQP9-201ENST00000445891 512 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 EEF1A1P1-201ENST00000447052 739 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL935212.3-201ENST00000450729 284 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL121877.1-201ENST00000453704 622 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 SETP20-201ENST00000457046 852 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC104687.1-201ENST00000485829 412 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RPL7P51-201ENST00000490532 749 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RPL15P21-201ENST00000495592 567 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC083829.1-201ENST00000503756 657 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC073358.1-201ENST00000505671 684 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RPS4XP20-201ENST00000505751 772 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.2□□□□□ -1.9
UBE2AP49459 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 SMARCE1P4-201ENST00000523647 241 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.2□□□□□ -1.9
UBE2AP49459 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.2□□□□□ -1.9
UBE2AP49459 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.2□□□□□ -1.9
UBE2AP49459 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 AL136520.1-202ENST00000555494 763 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 NDUFB4P11-201ENST00000560510 395 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC040958.1-201ENST00000561102 201 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 MIR4716-201ENST00000579628 84 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 RN7SL176P-201ENST00000580352 264 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC069304.3-201ENST00000603938 1084 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AL139286.1-201ENST00000604465 483 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC109309.2-201ENST00000612597 332 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 RMST_10.1-201ENST00000616309 154 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 AC009318.3-201ENST00000616916 503 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.2□□□□□ -1.9
UBE2AP49459 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBE2AP49459 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
UBE2AP49459 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 AC114947.2-201ENST00000565748 2125 ntBASIC3.2□□□□□ -1.9
UBE2AP49459 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.2□□□□□ -1.9
UBE2AP49459 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.2□□□□□ -1.9
UBE2AP49459 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBE2AP49459 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBE2AP49459 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBE2AP49459 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBE2AP49459 AC114546.3-201ENST00000623582 1734 ntBASIC3.19□□□□□ -1.9
UBE2AP49459 AC012020.1-201ENST00000624541 1728 ntBASIC3.19□□□□□ -1.9
UBE2AP49459 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.19□□□□□ -1.9
UBE2AP49459 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.19□□□□□ -1.9
UBE2AP49459 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UBE2AP49459 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms