Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.76□□□□□ -1.65
SOX2P48431 AC083843.2-201ENST00000568248 6253 ntBASIC4.76□□□□□ -1.65
SOX2P48431 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 OR9K1P-201ENST00000326513 941 ntBASIC4.76□□□□□ -1.65
SOX2P48431 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 RNA5SP477-201ENST00000362639 119 ntBASIC4.76□□□□□ -1.65
SOX2P48431 Y_RNA.318-201ENST00000365131 97 ntBASIC4.76□□□□□ -1.65
SOX2P48431 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 OR52E6-202ENST00000379946 954 ntBASIC4.76□□□□□ -1.65
SOX2P48431 RSL24D1P4-201ENST00000400938 484 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 AC114814.2-201ENST00000419195 485 ntBASIC4.76□□□□□ -1.65
SOX2P48431 SEPT2P1-201ENST00000419651 180 ntBASIC4.76□□□□□ -1.65
SOX2P48431 ZNF885P-201ENST00000420174 1098 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC007435.1-201ENST00000421086 415 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC066692.1-201ENST00000421721 457 ntBASIC4.76□□□□□ -1.65
SOX2P48431 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.76□□□□□ -1.65
SOX2P48431 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 HMGN2P27-201ENST00000427352 270 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AL022331.1-201ENST00000429025 477 ntBASIC4.76□□□□□ -1.65
SOX2P48431 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 SGO1P2-201ENST00000429458 1589 ntBASIC4.76□□□□□ -1.65
SOX2P48431 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 AC007679.3-201ENST00000434035 414 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AL445567.1-201ENST00000439121 144 ntBASIC4.76□□□□□ -1.65
SOX2P48431 ARL4AP3-201ENST00000441452 574 ntBASIC4.76□□□□□ -1.65
SOX2P48431 EEF1B2P3-201ENST00000447718 678 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC079776.3-201ENST00000450665 370 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SOX2P48431 RNU7-125P-201ENST00000458760 62 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.76□□□□□ -1.65
SOX2P48431 AL049874.2-201ENST00000492636 288 ntBASIC4.76□□□□□ -1.65
SOX2P48431 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 ECM1P2-201ENST00000503354 1577 ntBASIC4.76□□□□□ -1.65
SOX2P48431 NENFP3-201ENST00000503735 313 ntBASIC4.76□□□□□ -1.65
SOX2P48431 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 MTND1P22-201ENST00000510572 951 ntBASIC4.76□□□□□ -1.65
SOX2P48431 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 HMGB1P42-201ENST00000532126 553 ntBASIC4.76□□□□□ -1.65
SOX2P48431 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 AC125612.1-201ENST00000547580 377 ntBASIC4.76□□□□□ -1.65
SOX2P48431 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 AL845552.1-201ENST00000556820 323 ntBASIC4.76□□□□□ -1.65
SOX2P48431 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.76□□□□□ -1.65
SOX2P48431 NPM1P47-201ENST00000560843 856 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.76□□□□□ -1.65
SOX2P48431 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 BNIP3P26-201ENST00000600827 554 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 AC006363.1-201ENST00000603806 463 ntBASIC4.76□□□□□ -1.65
SOX2P48431 AC069545.1-201ENST00000605671 358 ntBASIC4.76□□□□□ -1.65
SOX2P48431 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 AC121761.2-201ENST00000617300 689 ntBASIC4.76□□□□□ -1.65
SOX2P48431 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 AC135068.5-201ENST00000624197 983 ntBASIC4.76□□□□□ -1.65
SOX2P48431 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.76□□□□□ -1.65
SOX2P48431 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SOX2P48431 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.76□□□□□ -1.65
SOX2P48431 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.76□□□□□ -1.65
SOX2P48431 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SOX2P48431 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 AC104623.2-202ENST00000623477 4002 ntBASIC4.75□□□□□ -1.65
SOX2P48431 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 MTND4P31-201ENST00000425607 1343 ntBASIC4.75□□□□□ -1.65
SOX2P48431 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX2P48431 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 AC021755.1-201ENST00000559747 1447 ntBASIC4.75□□□□□ -1.65
SOX2P48431 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.75□□□□□ -1.65
SOX2P48431 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.75□□□□□ -1.65
SOX2P48431 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SOX2P48431 RNU4-4P-201ENST00000364588 130 ntBASIC4.75□□□□□ -1.65
SOX2P48431 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SOX2P48431 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SOX2P48431 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SOX2P48431 SNORD116-9-201ENST00000384000 95 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms