Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC017104.5-201ENST00000637647 639 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.23□□□□□ -1.73
NKX2-1P43699 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-1P43699 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-1P43699 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AL049737.1-201ENST00000413920 1403 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX2-1P43699 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX2-1P43699 MIR525-201ENST00000384978 85 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 HMGB1P20-201ENST00000402555 677 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 U3.32-201ENST00000408116 212 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 RNU2-65P-201ENST00000410162 185 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 RN7SKP240-201ENST00000410583 375 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 TNPO1P1-201ENST00000423641 1138 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC115283.1-201ENST00000427353 400 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 YWHAEP5-201ENST00000431545 765 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 GAPDHP25-201ENST00000447061 1001 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AL445665.1-202ENST00000452436 324 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AL356981.1-201ENST00000454879 684 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 CDC42P1-201ENST00000456658 548 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 RPS27AP2-201ENST00000457576 465 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 SNORD11.1-201ENST00000459482 85 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC112206.1-201ENST00000468416 477 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AP001160.4-201ENST00000596971 382 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AC118658.2-201ENST00000618697 459 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AC109809.1-201ENST00000619665 545 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 AC092608.3-201ENST00000625017 386 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NKX2-1P43699 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.22□□□□□ -1.73
NKX2-1P43699 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
NKX2-1P43699 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NKX2-1P43699 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-1P43699 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.22□□□□□ -1.73
NKX2-1P43699 AC106872.5-201ENST00000508856 1416 ntBASIC4.21□□□□□ -1.73
NKX2-1P43699 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NKX2-1P43699 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
NKX2-1P43699 USP9YP4-201ENST00000424401 1745 ntBASIC4.21□□□□□ -1.73
NKX2-1P43699 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 OR52B3P-201ENST00000314715 928 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 SNORA16A-201ENST00000384342 137 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 OR8V1P-201ENST00000395193 873 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 SNORA11C-201ENST00000408532 129 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 HMGN1P20-201ENST00000411849 300 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 MTATP6P20-201ENST00000414147 562 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 SRSF1P1-201ENST00000424058 520 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 AL139148.1-201ENST00000427122 680 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 COX6CP13-201ENST00000428703 226 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-1P43699 TPTE2P6-202ENST00000445572 1007 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 YWHAQP9-201ENST00000445891 512 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 EIF4A1P11-201ENST00000451239 222 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 HLA-DPA3-207ENST00000454398 229 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms