Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 uc_338.18-201ENST00000615451 175 ntBASIC6.97□□□□□ -1.29
LMNB1P20700 AC121761.2-201ENST00000617300 689 ntBASIC6.97□□□□□ -1.29
LMNB1P20700 AC091953.3-201ENST00000623220 236 ntBASIC6.97□□□□□ -1.29
LMNB1P20700 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.97□□□□□ -1.29
LMNB1P20700 AC087821.2-201ENST00000637086 450 ntBASIC6.97□□□□□ -1.29
LMNB1P20700 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.97□□□□□ -1.29
LMNB1P20700 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.97□□□□□ -1.29
LMNB1P20700 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LMNB1P20700 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
LMNB1P20700 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.97□□□□□ -1.29
LMNB1P20700 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.97□□□□□ -1.29
LMNB1P20700 AC092692.1-201ENST00000623625 2595 ntBASIC6.97□□□□□ -1.29
LMNB1P20700 AC110373.1-201ENST00000505994 3505 ntBASIC6.97□□□□□ -1.29
LMNB1P20700 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LMNB1P20700 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LMNB1P20700 AC011503.2-201ENST00000594230 1500 ntBASIC6.96□□□□□ -1.29
LMNB1P20700 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.96□□□□□ -1.29
LMNB1P20700 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
LMNB1P20700 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.96□□□□□ -1.29
LMNB1P20700 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LMNB1P20700 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LMNB1P20700 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
LMNB1P20700 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.96□□□□□ -1.29
LMNB1P20700 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LMNB1P20700 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
LMNB1P20700 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
LMNB1P20700 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
LMNB1P20700 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LMNB1P20700 RNA5SP335-201ENST00000363817 110 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 RNA5SP105-201ENST00000391123 113 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LMNB1P20700 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LMNB1P20700 RNU2-16P-201ENST00000410712 136 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 MTND4LP17-201ENST00000414607 293 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 OR6K4P-201ENST00000423179 955 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 AL031667.1-201ENST00000440222 725 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC112187.1-201ENST00000455837 479 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 RPL7P18-201ENST00000478965 734 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 AC083982.1-201ENST00000485679 344 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 NCOR1P1-202ENST00000486162 291 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 RN7SL447P-201ENST00000494711 245 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC004069.2-201ENST00000505438 1114 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 CBX3P3-201ENST00000508108 532 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.96□□□□□ -1.3
LMNB1P20700 EIF1P4-201ENST00000572664 335 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 ROCK1P1-201ENST00000573767 549 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 AL451074.6-201ENST00000608512 729 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 AP005137.2-201ENST00000609238 400 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC012618.3-205ENST00000637896 1496 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 AL442128.2-201ENST00000620246 1824 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 AC007114.2-201ENST00000576014 4281 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.96□□□□□ -1.3
LMNB1P20700 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LMNB1P20700 IMMTP1-201ENST00000435590 2219 ntBASIC6.96□□□□□ -1.3
LMNB1P20700 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LMNB1P20700 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
LMNB1P20700 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.95□□□□□ -1.3
LMNB1P20700 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LMNB1P20700 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LMNB1P20700 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
LMNB1P20700 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.95□□□□□ -1.3
LMNB1P20700 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LMNB1P20700 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LMNB1P20700 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LMNB1P20700 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
LMNB1P20700 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.95□□□□□ -1.3
LMNB1P20700 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
LMNB1P20700 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
LMNB1P20700 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
LMNB1P20700 AL672167.1-206ENST00000356293 943 ntBASIC6.95□□□□□ -1.3
LMNB1P20700 U3.4-201ENST00000363352 213 ntBASIC6.95□□□□□ -1.3
LMNB1P20700 Y_RNA.516-201ENST00000384541 124 ntBASIC6.95□□□□□ -1.3
LMNB1P20700 CYB5AP4-201ENST00000396692 399 ntBASIC6.95□□□□□ -1.3
LMNB1P20700 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms