Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AOX3P-204ENST00000491025 2107 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.72-201ENST00000362894 103 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.142-201ENST00000363491 102 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 SNORA38B-201ENST00000363524 131 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 FAT1P1-201ENST00000406588 507 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RPL12P10-201ENST00000413498 498 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC007390.1-201ENST00000415722 356 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC245884.2-201ENST00000426257 404 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ATP5LP4-201ENST00000434169 307 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC022364.2-201ENST00000457963 554 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC079193.1-201ENST00000460497 588 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RN7SL216P-201ENST00000471607 298 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RPL5P12-201ENST00000477071 851 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RN7SKP242-201ENST00000515967 289 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.675-201ENST00000516389 149 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RNU6-1153P-201ENST00000516760 105 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 HSPA8P13-201ENST00000523715 472 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AP003122.4-201ENST00000530980 758 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 SSU72P6-201ENST00000532644 488 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 PPIAP6-201ENST00000557078 499 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 MIR5186-201ENST00000577504 120 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL162413.1-201ENST00000603198 110 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC139792.3-201ENST00000623525 224 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC091905.1-201ENST00000624400 311 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHISA3A0PJX4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RNU6-769P-201ENST00000384407 104 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 Y_RNA.529-201ENST00000384586 119 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RNU1-149P-201ENST00000390870 161 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RNA5SP474-201ENST00000391234 90 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RNA5SP53-201ENST00000391299 120 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPSAP44-201ENST00000406712 884 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms