Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SHANK2Q9UPX8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
SHANK2Q9UPX8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.52□□□□□ -1.36
SHANK2Q9UPX8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 SNORA59A-201ENST00000459326 152 ntBASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 TPT1P3-201ENST00000492841 512 ntBASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 NPM1P41-201ENST00000512920 831 ntBASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 RNA5SP360-201ENST00000516555 118 ntBASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 OR5BC1P-201ENST00000529327 739 ntBASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SHANK2Q9UPX8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 OR2AH1P-201ENST00000425717 928 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 RPL7P2-201ENST00000427639 268 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 AL356276.2-201ENST00000435919 558 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 ARAFP2-201ENST00000440565 559 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 AC010503.3-201ENST00000594355 540 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 AC005520.3-201ENST00000602874 370 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 NXPH1-205ENST00000602349 1953 ntBASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SHANK2Q9UPX8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AL035696.2-201ENST00000407941 709 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AL050321.1-201ENST00000432363 400 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 VN1R32P-201ENST00000452234 905 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC104164.2-201ENST00000496953 495 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 PARP4P3-201ENST00000510265 317 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC099522.1-202ENST00000514718 367 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 Z98200.1-201ENST00000607298 470 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 MIR6875-201ENST00000617506 72 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 AC027228.2-201ENST00000567141 2154 ntBASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SHANK2Q9UPX8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 RNA5SP513-201ENST00000364648 118 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 AL445584.1-201ENST00000431451 330 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 RPS26P4-201ENST00000431743 355 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 RPS29P7-201ENST00000439662 171 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 AL512326.1-201ENST00000443050 721 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 AC108751.2-201ENST00000469993 231 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 RPS4XP18-201ENST00000495480 763 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 RNA5SP73-201ENST00000516744 108 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 COX6CP4-201ENST00000605798 228 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 MIR8069-1-201ENST00000616627 86 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 MIR8069-2-201ENST00000621412 86 ntBASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms