Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 RNA5SP146-201ENST00000410743 123 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC004690.1-201ENST00000418216 328 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC010326.1-201ENST00000462726 602 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC104763.1-201ENST00000475274 360 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 IGLV2-34-201ENST00000490007 283 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC015912.2-201ENST00000571053 181 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AL020997.2-201ENST00000602607 184 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC073091.2-201ENST00000603205 907 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC006338.2-201ENST00000616864 791 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC010928.1-201ENST00000592477 1447 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 VPS35P1-201ENST00000563400 1518 ntBASIC5.53□□□□□ -1.52
CTNNA3Q9UI47 AC139713.2-215ENST00000641428 5037 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC108751.5-201ENST00000492880 1336 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC108467.2-201ENST00000617640 1597 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 TRGV7-201ENST00000427089 353 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 RPL36AP15-201ENST00000444514 266 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 ISCUP1-201ENST00000454451 448 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 snoU13.1-201ENST00000459157 104 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 SCARNA10-201ENST00000459255 330 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 RPL7AP28-201ENST00000464513 571 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 RPL5P16-201ENST00000471467 790 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC007016.1-201ENST00000512110 244 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 ATP5J2P6-201ENST00000565203 266 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 RN7SL690P-201ENST00000582087 240 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC091979.2-201ENST00000607514 214 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AC004232.3-201ENST00000622977 525 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 AP003400.2-201ENST00000624036 666 ntBASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CTNNA3Q9UI47 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 RPL32P3-201ENST00000359025 275 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 SDHCP2-201ENST00000398565 501 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 GLULP6-201ENST00000399502 913 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 RPS24P12-201ENST00000402084 394 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC073587.1-201ENST00000447093 876 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC022431.1-201ENST00000450941 438 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 OR5M2P-201ENST00000529003 936 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 RPL26P30-202ENST00000602923 645 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 KARSP3-201ENST00000571212 1504 ntBASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CTNNA3Q9UI47 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms