Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA9Q9UGM1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA9Q9UGM1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA9Q9UGM1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA9Q9UGM1 SALL4P2-201ENST00000423288 2910 ntBASIC4.42□□□□□ -1.7
CHRNA9Q9UGM1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 VN2R3P-201ENST00000422626 1412 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC083799.1-201ENST00000366451 910 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AL645927.1-201ENST00000396783 406 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AL589647.1-201ENST00000402485 466 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 U3.35-201ENST00000408405 208 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RN7SKP278-201ENST00000410504 342 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RNA5SP345-201ENST00000410646 108 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RANP4-201ENST00000413361 655 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AL590623.1-201ENST00000427864 105 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RPL12P28-201ENST00000430852 489 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC112498.1-201ENST00000444401 332 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AL445433.1-201ENST00000457507 257 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC112206.1-201ENST00000468416 477 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RN7SL346P-201ENST00000491561 294 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RN7SKP46-201ENST00000515942 234 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC012414.2-201ENST00000559474 187 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC016180.1-201ENST00000567945 403 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 MTCO3P22-201ENST00000603219 784 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC020910.3-201ENST00000603701 874 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC211433.2-201ENST00000608433 387 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC012414.7-202ENST00000622705 1090 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC020763.5-201ENST00000623298 430 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 CR381572.2-201ENST00000624852 397 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 MAPK10-320ENST00000641462 6696 ntBASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.41□□□□□ -1.7
CHRNA9Q9UGM1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.4□□□□□ -1.7
CHRNA9Q9UGM1 AC091046.3-201ENST00000631455 1574 ntBASIC4.4□□□□□ -1.7
CHRNA9Q9UGM1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA9Q9UGM1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.4□□□□□ -1.7
CHRNA9Q9UGM1 AC009951.1-201ENST00000623674 2614 ntBASIC4.4□□□□□ -1.7
CHRNA9Q9UGM1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 RN7SKP104-201ENST00000362605 328 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AL592291.1-201ENST00000403830 352 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 PTMAP6-201ENST00000439110 327 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AL645937.3-201ENST00000453647 936 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC010683.1-201ENST00000473673 378 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC090543.1-201ENST00000492168 485 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 HIGD1AP18-201ENST00000520730 278 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 EDDM3DP-201ENST00000554692 434 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AL049839.1-201ENST00000556151 657 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 NPM1P47-201ENST00000560843 856 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 MIR4646-201ENST00000580775 63 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC242628.1-201ENST00000606810 391 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 MIR6719-201ENST00000622428 87 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC006453.5-201ENST00000636451 619 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 CCT8P1-201ENST00000413611 1657 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 Z73965.1-201ENST00000623412 2297 ntBASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA9Q9UGM1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 AL133268.1-201ENST00000405676 1401 ntBASIC4.39□□□□□ -1.71
CHRNA9Q9UGM1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms