Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 RLIMP2-201ENST00000427891 1563 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 AC126323.6-202ENST00000568092 3511 ntBASIC5.02□□□□□ -1.61
PCDH9Q9HC56 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH9Q9HC56 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AL021331.1-201ENST00000402817 582 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AL357515.1-201ENST00000402967 542 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AP002530.1-201ENST00000405705 684 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 E2F6P2-201ENST00000420708 748 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AL606517.1-201ENST00000446914 387 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 snoU13.20-201ENST00000459180 104 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 RN7SL97P-201ENST00000486780 299 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 SUMO1P1-201ENST00000497904 306 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 GTF2IP9-201ENST00000502460 301 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC140172.1-201ENST00000502928 141 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 RN7SKP34-201ENST00000516142 244 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AP005262.1-201ENST00000582646 997 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AP004372.1-201ENST00000604842 844 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 IMMP1LP1-201ENST00000605170 488 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC034236.3-201ENST00000605999 461 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC112503.2-201ENST00000609005 552 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AP005229.2-201ENST00000609980 697 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AL159169.2-201ENST00000610061 1269 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 MIR7155-201ENST00000615925 56 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC068870.2-201ENST00000620635 389 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC091905.4-201ENST00000623432 202 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 OR4G3P-201ENST00000633500 913 ntBASIC5.01□□□□□ -1.61
PCDH9Q9HC56 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH9Q9HC56 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 AL359715.4-201ENST00000606629 1436 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AL645927.1-201ENST00000396783 406 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 TAF9BP2-201ENST00000400856 499 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 RNA5SP345-201ENST00000410646 108 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AL024507.1-201ENST00000412741 274 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 TBCAP2-201ENST00000416175 326 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5□□□□□ -1.61
PCDH9Q9HC56 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5□□□□□ -1.61
PCDH9Q9HC56 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5□□□□□ -1.61
PCDH9Q9HC56 AL450263.2-201ENST00000439400 589 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5□□□□□ -1.61
PCDH9Q9HC56 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5□□□□□ -1.61
PCDH9Q9HC56 AC116562.1-201ENST00000485355 781 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 HAUS1P1-201ENST00000505275 832 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5□□□□□ -1.61
PCDH9Q9HC56 RNU5A-7P-201ENST00000515979 116 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 RNU6-709P-201ENST00000517257 104 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH9Q9HC56 AL121594.4-201ENST00000556211 1196 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AC087477.6-201ENST00000559595 843 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 MTND1P8-201ENST00000571424 950 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 SNORA74C-1-201ENST00000580726 201 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5□□□□□ -1.61
PCDH9Q9HC56 AC073137.1-201ENST00000605636 634 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5□□□□□ -1.61
PCDH9Q9HC56 AC008147.4-201ENST00000617570 1204 ntBASIC5□□□□□ -1.61
PCDH9Q9HC56 AC091046.2-201ENST00000620775 665 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms