Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL078604.1-201ENST00000404609 466 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL691447.1-201ENST00000419456 387 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC062016.2-201ENST00000420950 676 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 NPM1P26-201ENST00000426339 738 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL359265.2-201ENST00000434367 631 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC011753.3-201ENST00000443436 406 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 PTMAP3-201ENST00000447474 330 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 DDX39BP2-208ENST00000453923 258 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC010326.1-201ENST00000462726 602 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC092905.1-201ENST00000467527 949 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC108022.1-201ENST00000493466 478 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 IGKV2D-10-201ENST00000520194 281 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC008759.1-201ENST00000589783 983 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL133338.2-201ENST00000604292 736 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 Z98200.1-201ENST00000607298 470 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC007546.2-201ENST00000623996 360 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL450326.2-201ENST00000421913 1962 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL592182.3-201ENST00000642132 3304 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 AL356317.1-201ENST00000396110 1436 ntBASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RSPO3Q9BXY4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC068254.2-201ENST00000623938 3577 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 LINC01109-201ENST00000603837 3081 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 SNORD113.2-201ENST00000364166 89 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 RPL21P108-201ENST00000413857 481 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC073136.2-201ENST00000417282 849 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AL121578.1-201ENST00000428051 892 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC091390.1-201ENST00000433904 331 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 RPL7P33-201ENST00000444159 742 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC107015.1-201ENST00000466902 747 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 PRELID3BP5-201ENST00000508612 460 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 RAB9BP1-201ENST00000519581 626 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC022882.1-201ENST00000532142 501 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC122134.1-201ENST00000565664 1104 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC087283.1-201ENST00000604029 1074 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AL023583.1-201ENST00000607518 1143 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 MIR378J-201ENST00000611988 109 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 AC007546.1-201ENST00000619452 559 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO3Q9BXY4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
RSPO3Q9BXY4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RNU1-32P-201ENST00000363937 159 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 SNORA62-201ENST00000365493 153 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 GLULP6-201ENST00000399502 913 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms