Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 OR52A4P-202ENST00000481634 799 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 MTND4LP2-201ENST00000502312 285 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC093763.2-201ENST00000505334 1223 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC147055.3-201ENST00000510547 851 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC067904.2-201ENST00000517322 1283 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 MIR4310-201ENST00000582950 57 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 HMGB1P51-201ENST00000605166 638 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 Z98200.1-201ENST00000607298 470 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AL512624.1-201ENST00000613638 469 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 SNX18P1Y-201ENST00000616231 511 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC003001.2-201ENST00000616294 831 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 MIR6729-201ENST00000618194 65 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AP001005.3-201ENST00000622049 129 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 LINC01109-201ENST00000603837 3081 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 VN2R3P-201ENST00000422626 1412 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 AC010928.1-201ENST00000592477 1447 ntBASIC3.78□□□□□ -1.8
HDHD3Q9BSH5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC109780.1-201ENST00000451768 1344 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 MAPK10-304ENST00000641341 3984 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 SNORA51.1-201ENST00000363243 140 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 ST13P16-201ENST00000401760 781 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AL078604.1-201ENST00000404609 466 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 RPL23AP93-201ENST00000440847 484 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 DDX39BP2-208ENST00000453923 258 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 PSMC1P13-201ENST00000458195 985 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC092905.1-201ENST00000467527 949 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 RPL7AP6-201ENST00000477943 801 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 PPBPP1-201ENST00000510807 373 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 OR7E10P-201ENST00000526420 991 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 HMGN2P6-201ENST00000551091 273 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC012414.2-201ENST00000559474 187 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 BGLT3-201ENST00000564523 994 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 MIR3667-201ENST00000581025 74 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC087283.1-201ENST00000604029 1074 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 KATNBL1P1-201ENST00000605192 748 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 MIR6886-201ENST00000619864 61 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC007546.2-201ENST00000623996 360 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 OR2L1P-202ENST00000641567 1023 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 AC093775.1-201ENST00000624154 1868 ntBASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.77□□□□□ -1.81
HDHD3Q9BSH5 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 AC091046.3-201ENST00000631455 1574 ntBASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 KARSP3-201ENST00000571212 1504 ntBASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 ZNF137P-201ENST00000456718 1920 ntBASIC3.76□□□□□ -1.81
HDHD3Q9BSH5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms