Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 PABPC1P8-201ENST00000452851 2086 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 RPL23AP57-201ENST00000332361 466 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 RNA5SP301-201ENST00000362537 121 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 RNU6-289P-201ENST00000364093 107 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 SNORD50B-201ENST00000364995 70 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 Y_RNA.389-201ENST00000383924 113 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 RNU6-472P-201ENST00000384299 107 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HPS1Q92902 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 COX6A1P3-201ENST00000404167 293 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 RN7SKP39-201ENST00000410773 322 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 Y_RNA.646-201ENST00000410980 101 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC244452.1-201ENST00000413798 141 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 RPSAP59-201ENST00000421048 890 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AL139396.1-201ENST00000421137 167 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC006548.1-201ENST00000427470 102 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 RPL21P91-201ENST00000429231 479 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 FDPSP8-201ENST00000438304 1089 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC073109.1-201ENST00000445066 978 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AL590664.1-201ENST00000448065 339 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 RPL7AP56-201ENST00000476420 791 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AL355076.1-201ENST00000484315 270 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC104687.1-201ENST00000485829 412 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 AL449212.1-201ENST00000499853 517 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 MTND6P8-201ENST00000503471 522 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC116655.1-201ENST00000508324 901 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 RNU6-138P-201ENST00000515952 107 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 Y_RNA.661-201ENST00000516003 99 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 MIR3118-1-201ENST00000581787 76 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 MIR3128-201ENST00000581957 66 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC090312.2-201ENST00000582687 378 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.85□□□□□ -1.31
HPS1Q92902 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.85□□□□□ -1.31
HPS1Q92902 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.85□□□□□ -1.31
HPS1Q92902 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HPS1Q92902 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HPS1Q92902 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS1Q92902 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS1Q92902 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HPS1Q92902 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
HPS1Q92902 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.84□□□□□ -1.31
HPS1Q92902 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 RNU6-770P-201ENST00000363929 105 ntBASIC6.84□□□□□ -1.31
HPS1Q92902 RNU4-66P-201ENST00000365199 138 ntBASIC6.84□□□□□ -1.31
HPS1Q92902 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HPS1Q92902 RNVU1-15-201ENST00000384476 165 ntBASIC6.84□□□□□ -1.31
HPS1Q92902 AL445529.1-201ENST00000398713 389 ntBASIC6.84□□□□□ -1.31
HPS1Q92902 AL034417.1-201ENST00000399343 800 ntBASIC6.84□□□□□ -1.31
HPS1Q92902 GEMIN2P2-201ENST00000418195 715 ntBASIC6.84□□□□□ -1.31
HPS1Q92902 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HPS1Q92902 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms